About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama09013
Ama09014
Ama09015NETRIN/LAMININ-RELATED
Ama09016NETRIN/LAMININ-RELATED
Ama09017C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED
Ama09018-
Ama09019PROTEIN YIPPEE-LIKE CG15309-RELATED
Ama09020EH DOMAIN
Ama09022
Ama09024EH DOMAIN
Ama09025
Ama09026-
Ama09027RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama09028HEAT SHOCK PROTEIN 70KDA
Ama09030APOPTOSIS-STIMULATING OF P53 PROTEIN
Ama09031APOPTOSIS-STIMULATING OF P53 PROTEIN
Ama09032THIOREDOXIN DOMAIN-CONTAINING PROTEIN 16
Ama09033SPERMATOGENESIS-ASSOCIATED PROTEIN 7
Ama09035PROBABLE MEMBRANE PROTEIN DUF221-RELATED
Ama09036
Ama09038
Ama09041ZYGIN
Ama09042HEAT SHOCK PROTEIN 70KDA
Ama09043
Ama09044
Ama09046HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama09047RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama09048ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Ama09049DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Ama09051
Ama09052DEOXYRIBONUCLEASE TATDN2-RELATED
Ama09053ARV1
Ama09054GLYCOSYL HYDROLASE-RELATED
Ama09055
Ama09056COILIN
Ama09057
Ama09059SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
Ama09065
Ama09066PLEKHH PROTEIN
Ama09068
Ama09069TRANSPOSON
Ama09070AAA-FAMILY ATPASE
Ama09071GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Ama09072SYNDROMES PUTATIVE CHAPERONIN-RELATED
Ama09073
Ama09075G DOMAIN-CONTAINING PROTEIN
Ama09076G DOMAIN-CONTAINING PROTEIN
Ama09077UNCHARACTERIZED
Ama09078AGAP005574-PA
Ama09079THAP DOMAIN PROTEIN
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