The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama09013 | |
Ama09014 | |
Ama09015 | NETRIN/LAMININ-RELATED |
Ama09016 | NETRIN/LAMININ-RELATED |
Ama09017 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
Ama09018 | - |
Ama09019 | PROTEIN YIPPEE-LIKE CG15309-RELATED |
Ama09020 | EH DOMAIN |
Ama09022 | |
Ama09024 | EH DOMAIN |
Ama09025 | |
Ama09026 | - |
Ama09027 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama09028 | HEAT SHOCK PROTEIN 70KDA |
Ama09030 | APOPTOSIS-STIMULATING OF P53 PROTEIN |
Ama09031 | APOPTOSIS-STIMULATING OF P53 PROTEIN |
Ama09032 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 16 |
Ama09033 | SPERMATOGENESIS-ASSOCIATED PROTEIN 7 |
Ama09035 | PROBABLE MEMBRANE PROTEIN DUF221-RELATED |
Ama09036 | |
Ama09038 | |
Ama09041 | ZYGIN |
Ama09042 | HEAT SHOCK PROTEIN 70KDA |
Ama09043 | |
Ama09044 | |
Ama09046 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama09047 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama09048 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama09049 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama09051 | |
Ama09052 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama09053 | ARV1 |
Ama09054 | GLYCOSYL HYDROLASE-RELATED |
Ama09055 | |
Ama09056 | COILIN |
Ama09057 | |
Ama09059 | SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
Ama09065 | |
Ama09066 | PLEKHH PROTEIN |
Ama09068 | |
Ama09069 | TRANSPOSON |
Ama09070 | AAA-FAMILY ATPASE |
Ama09071 | GALACTOSIDE 2-L-FUCOSYLTRANSFERASE |
Ama09072 | SYNDROMES PUTATIVE CHAPERONIN-RELATED |
Ama09073 | |
Ama09075 | G DOMAIN-CONTAINING PROTEIN |
Ama09076 | G DOMAIN-CONTAINING PROTEIN |
Ama09077 | UNCHARACTERIZED |
Ama09078 | AGAP005574-PA |
Ama09079 | THAP DOMAIN PROTEIN |