The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama08885 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama08886 | CALCIUM BINDING PROTEIN |
Ama08887 | CALCIUM BINDING PROTEIN |
Ama08888 | CALCIUM BINDING PROTEIN |
Ama08889 | AUTOPHAGY-RELATED 2, ISOFORM A |
Ama08890 | METHYLTRANSFERASE-LIKE PROTEIN 24 |
Ama08891 | PUTATIVE-RELATED |
Ama08892 | PUTATIVE-RELATED |
Ama08893 | UNCHARACTERIZED |
Ama08894 | CALCIUM BINDING PROTEIN |
Ama08895 | CALCIUM BINDING PROTEIN |
Ama08896 | CALCIUM BINDING PROTEIN |
Ama08897 | FAM98 |
Ama08898 | DYNEIN 2 LIGHT INTERMEDIATE CHAIN, ISOFORM 2 |
Ama08899 | |
Ama08901 | CALCIUM BINDING PROTEIN |
Ama08902 | ALPHA-AMYLASE |
Ama08903 | PEPTIDASE S9 PROLYL OLIGOPEPTIDASE |
Ama08905 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama08906 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama08907 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
Ama08908 | GALACTOSE-3-O-SULFOTRANSFERASE |
Ama08909 | GALACTOSE-3-O-SULFOTRANSFERASE |
Ama08910 | NINEIN |
Ama08912 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama08913 | |
Ama08915 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama08916 | - |
Ama08917 | |
Ama08918 | |
Ama08920 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama08921 | TNF RECEPTOR ASSOCIATED FACTOR |
Ama08922 | F-BOX ONLY PROTEIN 6-LIKE PROTEIN |
Ama08923 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT |
Ama08924 | PROTEIN MAX MYC-ASSOCIATED FACTOR X |
Ama08926 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama08927 | |
Ama08928 | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 |
Ama08929 | NUCLEAR RNA EXPORT FACTOR |
Ama08931 | |
Ama08932 | SIMILAR TO 1700123O20RIK PROTEIN |
Ama08933 | GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2 |
Ama08934 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Ama08935 | AXIN INTERACTOR, DORSALIZATION-ASSOCIATED PROTEIN |
Ama08936 | SIMILAR TO RIKEN CDNA 2310022B05 |
Ama08937 | SYMPLEKIN-RELATED |
Ama08938 | FLAVIN MONOAMINE OXIDASE |
Ama08941 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama08944 | SI:CH211-108C17.2-RELATED-RELATED |
Ama08945 | XAP-5 PROTEIN-RELATED |