About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama08885REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama08886CALCIUM BINDING PROTEIN
Ama08887CALCIUM BINDING PROTEIN
Ama08888CALCIUM BINDING PROTEIN
Ama08889AUTOPHAGY-RELATED 2, ISOFORM A
Ama08890METHYLTRANSFERASE-LIKE PROTEIN 24
Ama08891PUTATIVE-RELATED
Ama08892PUTATIVE-RELATED
Ama08893UNCHARACTERIZED
Ama08894CALCIUM BINDING PROTEIN
Ama08895CALCIUM BINDING PROTEIN
Ama08896CALCIUM BINDING PROTEIN
Ama08897FAM98
Ama08898DYNEIN 2 LIGHT INTERMEDIATE CHAIN, ISOFORM 2
Ama08899
Ama08901CALCIUM BINDING PROTEIN
Ama08902ALPHA-AMYLASE
Ama08903PEPTIDASE S9 PROLYL OLIGOPEPTIDASE
Ama0890552 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama0890652 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama08907HEAT SHOCK PROTEIN HSP-12.2-RELATED
Ama08908GALACTOSE-3-O-SULFOTRANSFERASE
Ama08909GALACTOSE-3-O-SULFOTRANSFERASE
Ama08910NINEIN
Ama08912SET DOMAIN-CONTAINING PROTEIN-RELATED
Ama08913
Ama08915RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama08916-
Ama08917
Ama08918
Ama08920APPLE DOMAIN-CONTAINING PROTEIN
Ama08921TNF RECEPTOR ASSOCIATED FACTOR
Ama08922F-BOX ONLY PROTEIN 6-LIKE PROTEIN
Ama08923GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT
Ama08924PROTEIN MAX MYC-ASSOCIATED FACTOR X
Ama08926RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama08927
Ama08928TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2
Ama08929NUCLEAR RNA EXPORT FACTOR
Ama08931
Ama08932SIMILAR TO 1700123O20RIK PROTEIN
Ama08933GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2
Ama08934GUANINE NUCLEOTIDE EXCHANGE FACTOR
Ama08935AXIN INTERACTOR, DORSALIZATION-ASSOCIATED PROTEIN
Ama08936SIMILAR TO RIKEN CDNA 2310022B05
Ama08937SYMPLEKIN-RELATED
Ama08938FLAVIN MONOAMINE OXIDASE
Ama08941ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Ama08944SI:CH211-108C17.2-RELATED-RELATED
Ama08945XAP-5 PROTEIN-RELATED
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