The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama08545 | TRANSCRIPTION TERMINATION FACTOR 2-RELATED |
Ama08546 | GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN |
Ama08547 | STRIATIN |
Ama08548 | STRIATIN |
Ama08550 | |
Ama08551 | |
Ama08552 | |
Ama08553 | DIMETHYLANILINE MONOOXYGENASE |
Ama08554 | CYTOCHROME P450 FAMILY 4 |
Ama08555 | CYTOCHROME P450 FAMILY 4 |
Ama08556 | SOLUTE CARRIER FAMILY 25 |
Ama08558 | SERINE-THREONINE PROTEIN KINASE |
Ama08559 | |
Ama08560 | |
Ama08561 | ARRESTIN DOMAIN-CONTAINING PROTEIN D |
Ama08562 | RAP GTPASE-ACTIVATING PROTEIN |
Ama08565 | KIF1-BINDING PROTEIN |
Ama08566 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED |
Ama08567 | TYROSYL-DNA PHOSPHODIESTERASE 1 |
Ama08569 | ZINC FINGER PROTEIN 142 |
Ama08570 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
Ama08571 | PROTEIN CBG26694 |
Ama08572 | IP01015P-RELATED |
Ama08573 | ER MEMBRANE PROTEIN COMPLEX |
Ama08574 | TRANSMEMBRANE PROTEIN 42 |
Ama08575 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama08577 | CONNECTIVE TISSUE GROWTH FACTOR-RELATED |
Ama08578 | - |
Ama08581 | |
Ama08582 | MYOSIN LIGHT CHAIN 1, 3 |
Ama08584 | DNA REPAIR PROTEIN XRCC3 |
Ama08586 | SOLEUCYL-TRNA SYNTHETASE |
Ama08588 | 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED |
Ama08589 | PINN |
Ama08590 | UPF0692 PROTEIN C19ORF54 |
Ama08591 | PROTEASE M14 CARBOXYPEPTIDASE |
Ama08596 | RHO FAMILY GTPASE |
Ama08597 | NF-KAPPA-B INHIBITOR ALPHA |
Ama08599 | N-ALPHA-ACETYLTRANSFERASE 30 |
Ama08600 | BREAST CANCER METASTASIS-SUPPRESSOR 1 |
Ama08601 | CASEIN KINASE-RELATED |
Ama08602 | |
Ama08603 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20 |
Ama08604 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
Ama08605 | MUCIN 12EA-RELATED |
Ama08606 | PHOSPHOLIPASE D - RELATED |
Ama08607 | RIKEN CDNA D130052B06 GENE |
Ama08611 | |
Ama08612 | B-CELL LYMPHOMA/LEUKEMIA 11 |
Ama08613 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |