The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama08368 | |
Ama08373 | |
Ama08374 | |
Ama08375 | POLYCOMB GROUP PROTEIN |
Ama08376 | NADH-UBIQUINONE OXIDOREDUCTASE B15 SUBUNIT |
Ama08377 | FLAGELLAR RADIAL SPOKE PROTEIN 3 |
Ama08378 | |
Ama08379 | URINARY PROTEIN RUP /ACROSOMAL PROTEIN SP-10 |
Ama08383 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
Ama08385 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 32 |
Ama08386 | U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 |
Ama08387 | OSJNBA0013A04.12 PROTEIN |
Ama08388 | |
Ama08390 | |
Ama08391 | TUBULIN POLYGLUTAMYLASE |
Ama08392 | UBX DOMAIN CONTAINING PROTEIN |
Ama08396 | TUFTELIN-INTERACTING PROTEIN 11-RELATED |
Ama08397 | TUFTELIN-INTERACTING PROTEIN 11-RELATED |
Ama08399 | MERLIN/MOESIN/EZRIN/RADIXIN |
Ama08400 | MERLIN/MOESIN/EZRIN/RADIXIN |
Ama08401 | |
Ama08403 | GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN |
Ama08406 | |
Ama08407 | GLR0591 PROTEIN |
Ama08408 | POL PROTEIN |
Ama08409 | IODOTHYRONINE DEIODINASE |
Ama08410 | IODOTHYRONINE DEIODINASE |
Ama08411 | POL PROTEIN |
Ama08413 | UNCHARACTERIZED |
Ama08416 | |
Ama08417 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Ama08418 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
Ama08419 | GOLGI-ASSOCIATED PROTEIN GCP360-RELATED |
Ama08421 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 13B |
Ama08422 | |
Ama08423 | |
Ama08425 | BONUS, ISOFORM C-RELATED |
Ama08426 | |
Ama08432 | |
Ama08433 | |
Ama08434 | FERREDOXIN/ADRENODOXIN |
Ama08440 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama08442 | |
Ama08443 | |
Ama08444 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama08445 | |
Ama08446 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama08447 | WD REPEAT CONTAINING PROTEIN 3 WDR3 |
Ama08448 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama08449 | BLR2807 PROTEIN |