The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama08049 | G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN |
Ama08051 | TRANSPOSON |
Ama08054 | |
Ama08055 | BIOTINIDASE-RELATED |
Ama08056 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama08057 | |
Ama08058 | |
Ama08059 | |
Ama08060 | |
Ama08061 | G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN |
Ama08062 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Ama08063 | |
Ama08064 | |
Ama08065 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama08066 | ADHESION G-PROTEIN COUPLED RECEPTOR |
Ama08067 | |
Ama08068 | G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN |
Ama08070 | G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN |
Ama08071 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama08072 | |
Ama08074 | |
Ama08077 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama08078 | INHIBITOR OF APOPTOSIS |
Ama08079 | |
Ama08080 | WW DOMAIN BINDING PROTEIN 2, ISOFORM E |
Ama08081 | |
Ama08082 | INHIBITOR OF APOPTOSIS |
Ama08083 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama08085 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama08086 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama08087 | |
Ama08088 | |
Ama08089 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama08091 | ADHESION G-PROTEIN COUPLED RECEPTOR |
Ama08092 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama08093 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama08100 | |
Ama08103 | MUCIN-22 |
Ama08108 | LP04239P |
Ama08110 | |
Ama08114 | CADHERIN-87A |
Ama08119 | ADHESION G-PROTEIN COUPLED RECEPTOR |
Ama08120 | |
Ama08122 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama08124 | G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN |
Ama08125 | ADHESION G-PROTEIN COUPLED RECEPTOR |
Ama08128 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama08129 | THAP DOMAIN PROTEIN |
Ama08131 | |
Ama08132 |