The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama07670 | BEN DOMAIN-CONTAINING PROTEIN 3 |
Ama07671 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama07672 | REVERSE TRANSCRIPTASES |
Ama07673 | TRANSPOSABLE ELEMENT-RELATED |
Ama07674 | MYOSIN |
Ama07678 | BETA-1,4-GALACTOSYLTRANSFERASE |
Ama07679 | |
Ama07680 | BETA-1,4-GALACTOSYLTRANSFERASE |
Ama07681 | BETA-1,4-GALACTOSYLTRANSFERASE |
Ama07684 | |
Ama07685 | UNCHARACTERIZED |
Ama07686 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama07687 | - |
Ama07688 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama07689 | INHIBITOR OF APOPTOSIS |
Ama07690 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama07691 | |
Ama07692 | |
Ama07693 | |
Ama07694 | TATA-BOX BINDING PROTEIN |
Ama07695 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama07696 | INHIBITOR OF APOPTOSIS |
Ama07697 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama07698 | BETA-CAROTENE DIOXYGENASE |
Ama07699 | UNCHARACTERIZED |
Ama07700 | F-BOX/TPR REPEAT PROTEIN POF3 |
Ama07701 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama07703 | PERIAXIN/AHNAK |
Ama07705 | |
Ama07709 | |
Ama07710 | |
Ama07711 | |
Ama07712 | ATP-DEPENDENT DNA HELICASE |
Ama07713 | THAP DOMAIN PROTEIN |
Ama07714 | |
Ama07715 | ATP-DEPENDENT DNA HELICASE |
Ama07717 | |
Ama07719 | INHIBITOR OF APOPTOSIS |
Ama07722 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama07723 | INHIBITOR OF APOPTOSIS |
Ama07724 | BLR2807 PROTEIN |
Ama07726 | |
Ama07727 | |
Ama07728 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama07729 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 5 |
Ama07730 | INTERFERON-INDUCIBLE GTPASE |
Ama07731 | INTERFERON-INDUCIBLE GTPASE |
Ama07732 | |
Ama07733 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama07734 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |