The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama07549 | CUE DOMAIN CONTAINING 2 |
Ama07550 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama07551 | |
Ama07553 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama07555 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Ama07557 | |
Ama07561 | |
Ama07562 | TRANSPOSON |
Ama07563 | THAP DOMAIN PROTEIN |
Ama07564 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama07565 | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER |
Ama07566 | |
Ama07567 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama07568 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
Ama07569 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
Ama07570 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
Ama07572 | |
Ama07575 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
Ama07577 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
Ama07578 | CHAPERONIN |
Ama07579 | MACOILIN |
Ama07580 | PRION-LIKE- Q/N-RICH -DOMAIN-BEARING PROTEIN PROTEIN 44 |
Ama07581 | SMALL NUCLEAR RIBONUCLEOPROTEIN E |
Ama07582 | PROTEIN C6ORF130 |
Ama07583 | BRG-1 ASSOCIATED FACTOR 250 BAF250 |
Ama07584 | |
Ama07587 | THIOSULFATE SULFERTANSFERASE |
Ama07588 | PROTEIN C21ORF59 |
Ama07589 | RNA BINDING PROTEIN |
Ama07593 | CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN A |
Ama07594 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama07596 | EXPRESSED PROTEIN |
Ama07597 | DYNEIN HEAVY CHAIN |
Ama07598 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama07599 | |
Ama07600 | RNA-BINDING MOTIF PROTEIN 14B |
Ama07601 | RNA-BINDING MOTIF PROTEIN 14B |
Ama07602 | G-PROTEIN COUPLED RECEPTOR |
Ama07603 | |
Ama07604 | |
Ama07605 | TATA-BOX BINDING PROTEIN |
Ama07606 | INHIBITOR OF APOPTOSIS |
Ama07607 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama07608 | |
Ama07609 | PROTEIN CBG10425 |
Ama07610 | |
Ama07611 | NEPHRIN |
Ama07612 | |
Ama07613 | |
Ama07614 | NEPHRIN |