The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama07203 | QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1 |
Ama07206 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 |
Ama07208 | ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. |
Ama07210 | |
Ama07211 | |
Ama07212 | ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. |
Ama07213 | |
Ama07214 | |
Ama07215 | ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. |
Ama07216 | |
Ama07217 | |
Ama07219 | |
Ama07220 | |
Ama07221 | ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. |
Ama07222 | MALE FERTILITY FACTOR KL5 |
Ama07223 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
Ama07225 | |
Ama07226 | SYNAPTOTAGMIN |
Ama07228 | |
Ama07229 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
Ama07230 | COILED-COIL DOMAIN-CONTAINING PROTEIN 58 |
Ama07231 | IMPORTIN ALPHA |
Ama07233 | COILED-COIL DOMAIN-CONTAINING PROTEIN 81 |
Ama07236 | |
Ama07239 | STEERIN |
Ama07241 | UNCHARACTERIZED |
Ama07244 | |
Ama07246 | TRANSCRIPTION FACTOR E2F |
Ama07247 | |
Ama07248 | UNCHARACTERIZED |
Ama07249 | NEUROLIGIN |
Ama07250 | MONOCARBOXYLATE TRANSPORTER |
Ama07251 | |
Ama07261 | |
Ama07263 | |
Ama07264 | |
Ama07266 | JNK-INTERACTING PROTEIN 1-LIKE PROTEIN |
Ama07267 | SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 |
Ama07268 | TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL |
Ama07269 | MONOCARBOXYLATE TRANSPORTER |
Ama07270 | SI:CH211-108C17.2-RELATED-RELATED |
Ama07271 | |
Ama07272 | OS05G0424000 PROTEIN-RELATED |
Ama07274 | BETA-1,4-GALACTOSYLTRANSFERASE |
Ama07275 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG |
Ama07276 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama07277 | NERVE GROWTH FACTOR NGF -RELATED |
Ama07278 | |
Ama07279 | CORTACTIN AND DREBRIN |
Ama07280 | TRANSPOSON |