The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama06923 | 5'-NUCLEOTIDASE DOMAIN-CONTAINING |
Ama06926 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED |
Ama06927 | SYNAPTOTAGMIN |
Ama06928 | |
Ama06929 | DED DOMAIN-CONTAINING PROTEIN |
Ama06930 | |
Ama06931 | PUTATIVE-RELATED |
Ama06932 | SPERMATOGENESIS-ASSOCIATED SERINE-RICH PROTEIN 1 |
Ama06933 | |
Ama06934 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama06935 | ACETYL-COA CARBOXYLASE, ISOFORM A |
Ama06937 | ALPHA-MANNOSIDASE 2C1 |
Ama06939 | PUTATIVE-RELATED |
Ama06940 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama06941 | INHIBITOR OF APOPTOSIS |
Ama06944 | UNCHARACTERIZED |
Ama06945 | G-PROTEIN COUPLED RECEPTOR |
Ama06946 | |
Ama06950 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama06951 | |
Ama06952 | TATA-BOX BINDING PROTEIN |
Ama06953 | |
Ama06955 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama06956 | |
Ama06957 | |
Ama06958 | |
Ama06959 | |
Ama06960 | |
Ama06961 | XAA-PRO AMINOPEPTIDASE 1 |
Ama06962 | UNC-93 RELATED |
Ama06963 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama06964 | UNC-93 RELATED |
Ama06966 | F-BOX ONLY PROTEIN 3 |
Ama06967 | FTP DOMAIN-CONTAINING PROTEIN |
Ama06968 | |
Ama06969 | FTP DOMAIN-CONTAINING PROTEIN |
Ama06970 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
Ama06972 | GI:13385330 |
Ama06976 | UPF0041 BRAIN PROTEIN 44-RELATED |
Ama06977 | CARNITINE O-ACYLTRANSFERASE |
Ama06978 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama06979 | TRANSPOSON |
Ama06980 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama06981 | MOLTING PROTEIN MLT-4 |
Ama06982 | P53 REGULATED PA26 NUCLEAR PROTEIN SESTRIN |
Ama06983 | FMRFAMIDE RECEPTOR-RELATED |
Ama06984 | FMRFAMIDE RECEPTOR-RELATED |
Ama06985 | |
Ama06988 | |
Ama06989 |