The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama06510 | UPF0041 BRAIN PROTEIN 44-RELATED |
Ama06515 | PUTATIVE-RELATED |
Ama06516 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama06517 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama06518 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama06520 | BETA-1,4-GLUCURONYLTRANSFERASE 1 |
Ama06521 | UNCHARACTERIZED |
Ama06523 | DNA-DIRECTED RNA POLYMERASE |
Ama06524 | |
Ama06525 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama06526 | NEUROLIGIN |
Ama06528 | |
Ama06531 | PARANEOPLASTIC ANTIGEN |
Ama06532 | |
Ama06533 | SOLUTE CARRIER FAMILY 22 MEMBER |
Ama06535 | SOLUTE CARRIER FAMILY 22 MEMBER |
Ama06537 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
Ama06539 | SOLUTE CARRIER FAMILY 22 MEMBER |
Ama06540 | BONUS, ISOFORM C-RELATED |
Ama06541 | |
Ama06542 | BONUS, ISOFORM C-RELATED |
Ama06543 | |
Ama06544 | BONUS, ISOFORM C-RELATED |
Ama06545 | |
Ama06546 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama06548 | HISTIDINE-RICH GLYCOPROTEIN |
Ama06549 | CEREBELLIN-RELATED |
Ama06550 | DEOXYRIBOSE-PHOSPHATE ALDOLASE |
Ama06551 | |
Ama06552 | |
Ama06553 | BONUS, ISOFORM C-RELATED |
Ama06554 | BONUS, ISOFORM C-RELATED |
Ama06555 | G-PROTEIN COUPLED RECEPTOR |
Ama06556 | G-PROTEIN COUPLED RECEPTOR |
Ama06557 | G-PROTEIN COUPLED RECEPTOR |
Ama06559 | |
Ama06560 | |
Ama06564 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama06566 | ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 |
Ama06567 | CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1 |
Ama06568 | GEO13458P1 |
Ama06569 | |
Ama06571 | SENTRIN-SPECIFIC PROTEASE |
Ama06572 | |
Ama06573 | |
Ama06574 | ACETYL-COA C-ACYLTRANSFERASE |
Ama06575 | 60S RIBOSOMAL PROTEIN L36A/L44 |
Ama06577 | BONUS, ISOFORM C-RELATED |
Ama06578 | |
Ama06579 | PERFORIN-LIKE PROTEIN 1 |