The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama06787 | ZINC FINGER PROTEIN |
Ama06789 | |
Ama06790 | CYCLINS |
Ama06791 | |
Ama06792 | REVERSE TRANSCRIPTASES |
Ama06793 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
Ama06794 | UNCHARACTERIZED |
Ama06795 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama06796 | G-PROTEIN COUPLED RECEPTOR |
Ama06798 | G-PROTEIN COUPLED RECEPTOR |
Ama06799 | TRANSPOSABLE ELEMENT-RELATED |
Ama06801 | |
Ama06803 | |
Ama06804 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama06805 | THAP DOMAIN PROTEIN |
Ama06806 | THYMIDINE PHOSPHORYLASE |
Ama06807 | |
Ama06808 | |
Ama06809 | PUTATIVE-RELATED |
Ama06810 | |
Ama06811 | |
Ama06812 | THYMIDINE PHOSPHORYLASE |
Ama06813 | NADH DEHYDROGENASE (UBIQUINONE) 1 BETA SUBCOMPLEX, 4 |
Ama06814 | SPONDIN |
Ama06816 | TUBULIN |
Ama06817 | TUBULIN |
Ama06818 | TRANSPOSON |
Ama06819 | PUTATIVE-RELATED |
Ama06821 | BTK-BINDING PROTEIN-RELATED |
Ama06822 | BTK-BINDING PROTEIN-RELATED |
Ama06823 | CATALASE |
Ama06824 | KRAB DOMAIN C2H2 ZINC FINGER |
Ama06825 | CALPONIN |
Ama06826 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama06827 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
Ama06828 | CADHERIN DOMAIN-CONTAINING PROTEIN |
Ama06829 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
Ama06833 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama06834 | |
Ama06837 | |
Ama06838 | |
Ama06840 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama06841 | |
Ama06842 | |
Ama06843 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama06844 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama06845 | |
Ama06846 | |
Ama06847 | |
Ama06848 |