The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama06991 | |
Ama06992 | |
Ama06993 | SPLICING FACTOR SF3A-RELATED |
Ama06994 | WASP-1 |
Ama06995 | LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN |
Ama06996 | LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN |
Ama06997 | |
Ama06998 | MALIC ENZYME-RELATED |
Ama06999 | MALIC ENZYME-RELATED |
Ama07000 | PARANEOPLASTIC ANTIGEN |
Ama07001 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama07002 | NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 |
Ama07003 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama07004 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Ama07005 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama07007 | PUTATIVE-RELATED |
Ama07008 | PUTATIVE-RELATED |
Ama07009 | |
Ama07010 | |
Ama07011 | PUTATIVE-RELATED |
Ama07012 | |
Ama07014 | TRANSPOSON |
Ama07015 | |
Ama07016 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Ama07017 | CULLIN |
Ama07019 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama07027 | |
Ama07028 | |
Ama07029 | |
Ama07030 | PUTATIVE-RELATED |
Ama07031 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama07032 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama07033 | |
Ama07035 | |
Ama07036 | THAP DOMAIN PROTEIN |
Ama07037 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama07038 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama07039 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama07040 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47 |
Ama07041 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47 |
Ama07042 | DNAJ HOMOLOG SUBFAMILY C MEMBER |
Ama07043 | STG PROTEIN |
Ama07044 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama07045 | TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED |
Ama07046 | PHOSPHOLIPASE D |
Ama07048 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
Ama07050 | |
Ama07051 | |
Ama07053 | SUPEROXIDE DISMUTASE 2 |
Ama07056 | WILMS' TUMOR 1-ASSOCIATING PROTEIN |