The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama06849 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama06850 | |
Ama06851 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
Ama06852 | |
Ama06853 | |
Ama06854 | |
Ama06855 | |
Ama06856 | SERINE/THREONINE PROTEIN KINASE |
Ama06857 | HOMOGENTISATE 1,2-DIOXYGENASE |
Ama06858 | UNCHARACTERIZED |
Ama06861 | METABOTROPIC GLUTAMATE RECEPTOR |
Ama06862 | METABOTROPIC GLUTAMATE RECEPTOR |
Ama06863 | METABOTROPIC GLUTAMATE RECEPTOR |
Ama06865 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama06866 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama06867 | |
Ama06868 | |
Ama06872 | |
Ama06873 | |
Ama06874 | 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED |
Ama06875 | |
Ama06876 | SYNAPTOTAGMIN |
Ama06878 | ZINC FINGER PROTEIN |
Ama06881 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama06885 | |
Ama06889 | |
Ama06890 | AROMATIC AMINO ACID HYDROXYLASE |
Ama06891 | CCR4 NOT-RELATED |
Ama06892 | |
Ama06893 | SEC63 DOMAIN-CONTAINING |
Ama06894 | FERRITIN |
Ama06895 | RIKEN CDNA 1700001C19 GENE |
Ama06896 | 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN |
Ama06897 | |
Ama06898 | GLUTATHIONYL-HYDROQUINONE REDUCTASE |
Ama06899 | PROTEIN CBG23764 |
Ama06900 | SODIUM/NUCLEOSIDE COTRANSPORTER |
Ama06901 | |
Ama06903 | |
Ama06904 | |
Ama06905 | SODIUM/NUCLEOSIDE COTRANSPORTER |
Ama06906 | TRANSPOSABLE ELEMENT-RELATED |
Ama06907 | CARBOXYLESTERASE |
Ama06909 | |
Ama06913 | BLR2807 PROTEIN |
Ama06914 | RNA CLEAVAGE STIMULATION FACTOR |
Ama06916 | RE52028P |
Ama06917 | O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN |
Ama06920 | TRANSPOSON |
Ama06921 | LD44813P |