The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama07351 | |
Ama07352 | UNCHARACTERIZED |
Ama07353 | TRANSPOSABLE ELEMENT-RELATED |
Ama07354 | PUTATIVE-RELATED |
Ama07355 | |
Ama07357 | |
Ama07358 | INHIBITOR OF APOPTOSIS |
Ama07359 | |
Ama07360 | PUTATIVE-RELATED |
Ama07361 | |
Ama07362 | HEH2P |
Ama07363 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
Ama07364 | TRIACYLGLYCEROL LIPASE |
Ama07366 | TYROSINASE FAMILY MEMBER |
Ama07372 | PINSTRIPE, ISOFORM A |
Ama07373 | |
Ama07374 | |
Ama07375 | |
Ama07377 | |
Ama07378 | CYTOKINE RECEPTOR |
Ama07379 | |
Ama07380 | GERANYLGERANYL PYROPHOSPHATE SYNTHASE |
Ama07381 | THAP DOMAIN PROTEIN |
Ama07382 | ATP-DEPENDENT DNA HELICASE |
Ama07383 | |
Ama07384 | |
Ama07385 | |
Ama07386 | TRANSPOSABLE ELEMENT-RELATED |
Ama07387 | |
Ama07388 | |
Ama07389 | AGAP005574-PA |
Ama07390 | PUTATIVE-RELATED |
Ama07392 | |
Ama07393 | |
Ama07394 | |
Ama07395 | |
Ama07396 | |
Ama07397 | EBNA2 BINDING PROTEIN P100 |
Ama07398 | |
Ama07399 | |
Ama07400 | |
Ama07401 | |
Ama07402 | CADHERIN-23 |
Ama07403 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama07404 | |
Ama07405 | |
Ama07406 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama07407 | CADHERIN-23 |
Ama07408 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama07409 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |