The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama07477 | |
Ama07478 | DIGEORGE SYNDROME CRITICAL REGION 6 DGCR6 FAMILY MEMBER |
Ama07480 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED |
Ama07481 | |
Ama07482 | PROTEIN DISPATCHED-RELATED |
Ama07485 | POLYPHOSPHOINOSITIDE PHOSPHATASE |
Ama07486 | UNC80 |
Ama07487 | UNC80 |
Ama07489 | UNC80 |
Ama07490 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama07492 | |
Ama07494 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama07495 | ZINC FINGER C4H2 DOMAIN-CONTAINING PROTEIN |
Ama07496 | SYNAPTONEMAL COMPLEX PROTEIN 1 |
Ama07497 | SYNAPTONEMAL COMPLEX PROTEIN 1 |
Ama07499 | RIBOSOMAL PROTEIN S6 KINASE |
Ama07504 | INSCUTEABLE |
Ama07505 | SMALL VCP/P97-INTERACTING PROTEIN |
Ama07507 | DIMETHYLANILINE MONOOXYGENASE |
Ama07509 | DIMETHYLANILINE MONOOXYGENASE |
Ama07511 | MOLTING PROTEIN MLT-4 |
Ama07512 | |
Ama07515 | UNCHARACTERIZED |
Ama07516 | |
Ama07517 | SUGAR HYDROLASE-RELATED |
Ama07518 | SUGAR HYDROLASE-RELATED |
Ama07519 | BETA-GLUCOSIDASE |
Ama07520 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama07521 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama07523 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama07524 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama07525 | RNA RECOGNITION MOTIF-CONTAINING |
Ama07528 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
Ama07529 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama07530 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama07531 | PROTEIN CBR-CLEC-78 |
Ama07532 | PUTATIVE-RELATED |
Ama07533 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama07534 | |
Ama07535 | INHIBITOR OF APOPTOSIS |
Ama07537 | PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4 |
Ama07538 | RAS-LIKE FAMILY MEMBER 11 |
Ama07539 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama07541 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama07542 | INHIBITOR OF APOPTOSIS |
Ama07543 | |
Ama07544 | TRANSPOSON |
Ama07545 | |
Ama07547 | |
Ama07548 |