The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama07410 | SPLICING FACTOR YJU2 |
Ama07411 | |
Ama07412 | |
Ama07414 | |
Ama07416 | LEUCOKININ RECEPTOR-RELATED |
Ama07418 | |
Ama07420 | CYTOKINE RECEPTOR |
Ama07421 | TENASCIN |
Ama07422 | |
Ama07424 | TENASCIN |
Ama07425 | |
Ama07426 | |
Ama07427 | EIF-1A |
Ama07428 | SH3 DOMAIN-BINDING GLUTAMIC ACID-RICH-LIKE PROTEIN |
Ama07429 | C21ORF13-RELATED |
Ama07432 | GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN |
Ama07434 | |
Ama07437 | LIM DOMAIN-CONTAINING PROTEIN |
Ama07438 | CDC37-RELATED |
Ama07439 | |
Ama07440 | PUTATIVE-RELATED |
Ama07442 | |
Ama07443 | |
Ama07444 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama07445 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama07447 | CS DOMAIN-CONTAINING PROTEIN |
Ama07448 | |
Ama07449 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama07450 | MIXED LINEAGE PROTEIN KINASE |
Ama07451 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
Ama07453 | IST1 FAMILY MEMBER |
Ama07454 | COATOMER SUBUNIT BETA |
Ama07455 | PROTEIN AD-016-RELATED |
Ama07456 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama07457 | OSTEOPETROSIS ASSOCIATED TRANSMEMBRANE PROTEIN 1 |
Ama07458 | MITOCHONDRIAL RIBOSOMAL PROTEIN S31 |
Ama07459 | E3 UFM1-PROTEIN LIGASE 1 |
Ama07460 | MYOSIN LIGHT CHAIN 1, 3 |
Ama07461 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama07462 | |
Ama07463 | DOPEY-RELATED |
Ama07464 | DOPEY-RELATED |
Ama07465 | TRANSAMIDASE |
Ama07466 | |
Ama07467 | RETINOIC ACID-INDUCED PROTEIN 2 |
Ama07468 | |
Ama07471 | METAL TRANSPORTER CNNM |
Ama07473 | METAL TRANSPORTER CNNM |
Ama07475 | |
Ama07476 |