The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama07615 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama07616 | |
Ama07617 | |
Ama07618 | |
Ama07619 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama07620 | INHIBITOR OF APOPTOSIS |
Ama07621 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama07623 | HEAVY PROTEIN, PUTATIVE-RELATED |
Ama07624 | HEAVY PROTEIN, PUTATIVE-RELATED |
Ama07625 | AGAP001705-PA |
Ama07626 | |
Ama07627 | |
Ama07628 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama07629 | INHIBITOR OF APOPTOSIS |
Ama07630 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama07631 | |
Ama07632 | G-PROTEIN COUPLED RECEPTOR |
Ama07633 | |
Ama07634 | ZGC:101858 |
Ama07636 | |
Ama07638 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama07639 | INHIBITOR OF APOPTOSIS |
Ama07640 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama07641 | |
Ama07642 | |
Ama07643 | ADP-RIBOSYLGLYCOHYDROLASE |
Ama07644 | TRANSMEMBRANE PROTEIN 220 |
Ama07645 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama07646 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama07647 | |
Ama07648 | INHIBITOR OF APOPTOSIS |
Ama07649 | |
Ama07650 | |
Ama07651 | AGGRECAN/VERSICAN PROTEOGLYCAN |
Ama07652 | |
Ama07653 | |
Ama07654 | TATA-BOX BINDING PROTEIN |
Ama07655 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama07656 | |
Ama07657 | |
Ama07658 | UNCHARACTERIZED |
Ama07659 | |
Ama07660 | PROTEIN ARGININE N-METHYLTRANSFERASE |
Ama07661 | |
Ama07662 | POLY [ADP-RIBOSE] POLYMERASE |
Ama07665 | ACYL-COA SYNTHETASE |
Ama07666 | |
Ama07667 | |
Ama07668 | |
Ama07669 | UNCHARACTERIZED |