The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama07737 | GOLGIN-84 |
Ama07738 | TUBULIN |
Ama07739 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5 |
Ama07740 | SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN |
Ama07741 | ZINC FINGER PROTEIN |
Ama07742 | MICROSOMAL GLUTATHIONE S-TRANSFERASE |
Ama07743 | DOWNSTREAM NEIGHBOR OF SON |
Ama07744 | |
Ama07745 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama07749 | ANKYRIN REPEAT FAMILY PROTEIN |
Ama07750 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
Ama07751 | |
Ama07752 | RIBOSOMAL PROTEIN L13 |
Ama07753 | 3-5 EXONUCLEASE |
Ama07754 | CGI-41 METHYLTRANSFERASE |
Ama07755 | ACETYLGLUCOSAMINYLTRANSFERASE |
Ama07756 | PROTEIN CIP2A |
Ama07757 | |
Ama07758 | COILIN |
Ama07759 | SIALATE O-ACETYLESTERASE |
Ama07760 | TATA-BOX BINDING PROTEIN |
Ama07761 | |
Ama07764 | |
Ama07765 | SIT4 YEAST -ASSOCIATING PROTEIN-RELATED |
Ama07766 | DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED |
Ama07767 | WD REPEAT DOMAIN-CONTAINING FAMILY |
Ama07769 | VDJ RECOMBINATION ACTIVATING PROTEIN 1 RAG1 |
Ama07770 | |
Ama07771 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
Ama07772 | ARMADILLO REPEAT CONTAINING 2 |
Ama07773 | ADHESION G-PROTEIN COUPLED RECEPTOR |
Ama07775 | |
Ama07776 | ADHESION G-PROTEIN COUPLED RECEPTOR |
Ama07778 | |
Ama07779 | |
Ama07780 | CADHERIN-87A |
Ama07781 | NUCLEOPORIN NUP37 P37 -RELATED |
Ama07783 | |
Ama07785 | RE42071P |
Ama07786 | ARMADILLO REPEAT CONTAINING 2 |
Ama07788 | |
Ama07789 | IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG |
Ama07790 | TOLL-INTERACTING PROTEIN |
Ama07791 | HL07962P-RELATED |
Ama07792 | |
Ama07794 | EG:BACR7A4.20 PROTEIN |
Ama07795 | UNCHARACTERIZED |
Ama07796 | |
Ama07798 | MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER |
Ama07800 | INHIBITOR OF APOPTOSIS |