The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama07866 | UNCHARACTERIZED |
Ama07867 | |
Ama07868 | UNCHARACTERIZED |
Ama07869 | UNCHARACTERIZED |
Ama07870 | UNCHARACTERIZED |
Ama07873 | |
Ama07874 | |
Ama07875 | |
Ama07876 | INHIBITOR OF APOPTOSIS |
Ama07877 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama07878 | |
Ama07879 | INHIBITOR OF APOPTOSIS |
Ama07880 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama07882 | |
Ama07884 | UNCHARACTERIZED |
Ama07885 | UNCHARACTERIZED |
Ama07886 | |
Ama07887 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama07890 | UNCHARACTERIZED |
Ama07891 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama07892 | |
Ama07893 | |
Ama07894 | UNCHARACTERIZED |
Ama07895 | UNCHARACTERIZED |
Ama07896 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama07897 | |
Ama07898 | UNCHARACTERIZED |
Ama07899 | |
Ama07900 | INHIBITOR OF APOPTOSIS |
Ama07901 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
Ama07902 | MATING RESPONSE PROTEIN POI2 |
Ama07903 | |
Ama07905 | |
Ama07906 | - |
Ama07907 | - |
Ama07909 | TRANSPOSABLE ELEMENT-RELATED |
Ama07910 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
Ama07911 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
Ama07912 | SOLUTE CARRIER FAMILY 17 |
Ama07914 | |
Ama07915 | |
Ama07916 | |
Ama07917 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama07918 | SOLUBLE LIVER ANTIGEN/LIVER PANCREAS ANTIGEN |
Ama07920 | 3-5 EXONUCLEASE |
Ama07921 | HOMEOBOX PROTEIN HMX |
Ama07922 | |
Ama07923 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama07924 | PALMITOYLTRANSFERASE ZDHHC16 |
Ama07925 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |