The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama07801 | INHIBITOR OF APOPTOSIS |
Ama07802 | INHIBITOR OF APOPTOSIS |
Ama07803 | |
Ama07804 | INHIBITOR OF APOPTOSIS |
Ama07805 | INHIBITOR OF APOPTOSIS |
Ama07806 | DNA POLYMERASE |
Ama07807 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
Ama07808 | DIMETHYLANILINE MONOOXYGENASE |
Ama07809 | |
Ama07810 | TRANSPORTIN 3 AND IMPORTIN 13 |
Ama07811 | AP ENDONUCLEASE |
Ama07813 | IKB KINASE |
Ama07814 | FORKHEAD BOX PROTEIN O |
Ama07816 | INHIBITOR OF APOPTOSIS |
Ama07818 | |
Ama07819 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama07821 | |
Ama07822 | EH DOMAIN |
Ama07823 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
Ama07825 | |
Ama07826 | |
Ama07827 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama07828 | |
Ama07830 | CUBILIN |
Ama07832 | CHAPERONIN |
Ama07833 | CENTROSOMAL PROTEIN OF 290 KDA |
Ama07835 | DUF914-RELATED |
Ama07836 | DRAB11-RELATED |
Ama07837 | CENTROSOMAL PROTEIN OF 290 KDA |
Ama07838 | |
Ama07842 | SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED |
Ama07846 | CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER |
Ama07847 | |
Ama07848 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama07849 | SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1 |
Ama07850 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
Ama07851 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
Ama07852 | |
Ama07854 | |
Ama07855 | UNCHARACTERIZED |
Ama07856 | |
Ama07857 | UNCHARACTERIZED |
Ama07858 | UNCHARACTERIZED |
Ama07859 | |
Ama07860 | UNCHARACTERIZED |
Ama07861 | UNCHARACTERIZED |
Ama07862 | UNCHARACTERIZED |
Ama07863 | UNCHARACTERIZED |
Ama07864 | UNCHARACTERIZED |
Ama07865 |