The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
| Gene ID | Description |
|---|---|
| Ama07992 | UNCHARACTERIZED |
| Ama07993 | UNCHARACTERIZED |
| Ama07994 | |
| Ama07995 | UNCHARACTERIZED |
| Ama07996 | UNCHARACTERIZED |
| Ama07997 | UNCHARACTERIZED |
| Ama07998 | |
| Ama07999 | UNCHARACTERIZED |
| Ama08000 | |
| Ama08001 | |
| Ama08002 | |
| Ama08003 | |
| Ama08004 | |
| Ama08006 | |
| Ama08007 | |
| Ama08008 | UNCHARACTERIZED |
| Ama08009 | UNCHARACTERIZED |
| Ama08010 | |
| Ama08011 | UNCHARACTERIZED |
| Ama08012 | |
| Ama08013 | |
| Ama08014 | |
| Ama08016 | AAA DOMAIN-CONTAINING |
| Ama08017 | ACYL-COENZYME A THIOESTERASE-RELATED |
| Ama08018 | ACYL-COENZYME A THIOESTERASE-RELATED |
| Ama08019 | ACYL-COENZYME A THIOESTERASE-RELATED |
| Ama08020 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Ama08021 | BTB/POZ DOMAIN-CONTAINING |
| Ama08022 | |
| Ama08023 | REVERSE TRANSCRIPTASES |
| Ama08024 | NADPH OXIDASE |
| Ama08025 | |
| Ama08026 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| Ama08027 | HEXOKINASE |
| Ama08028 | |
| Ama08029 | |
| Ama08031 | |
| Ama08032 | |
| Ama08033 | UNCHARACTERIZED |
| Ama08034 | FI21293P1 |
| Ama08035 | |
| Ama08036 | |
| Ama08037 | |
| Ama08038 | YIPPEE DOMAIN-CONTAINING PROTEIN |
| Ama08041 | |
| Ama08042 | 2-HYDROXYACYL-COA LYASE |
| Ama08044 | - |
| Ama08045 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Ama08047 | |
| Ama08048 |
