The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama08222 | - |
Ama08223 | - |
Ama08225 | OS03G0233200 PROTEIN |
Ama08226 | CENTROSOMAL PROTEIN OF 162 KDA |
Ama08227 | |
Ama08228 | LD30288P |
Ama08229 | BTB/POZ DOMAIN-CONTAINING PROTEIN 10-RELATED |
Ama08230 | |
Ama08231 | PROTEIN PHOSPATASE 3 REGULATORY SUBUNIT B ALPHA ISOFORM TYPE 1 |
Ama08232 | TRANSLATION ELONGATION FACTOR-RELATED |
Ama08233 | |
Ama08234 | |
Ama08235 | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED |
Ama08237 | UNCHARACTERIZED |
Ama08238 | SI:CH73-193C12.2-RELATED |
Ama08239 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
Ama08240 | |
Ama08241 | |
Ama08242 | SEC63 DOMAIN-CONTAINING |
Ama08243 | SYNAPTOTAGMIN |
Ama08244 | |
Ama08245 | |
Ama08246 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama08247 | ASHWIN |
Ama08248 | |
Ama08249 | SPHINGOMYELINASE FAMILY MEMBER |
Ama08250 | |
Ama08252 | |
Ama08255 | SEC24-RELATED PROTEIN |
Ama08256 | RNA POLYMERASE II HOLOENZYME COMPONENT SRB7 |
Ama08258 | |
Ama08259 | CALCYPHOSIN |
Ama08260 | |
Ama08261 | UNCHARACTERIZED |
Ama08264 | G-PROTEIN COUPLED RECEPTOR |
Ama08265 | ZGC:101858 |
Ama08266 | |
Ama08267 | |
Ama08268 | AP ENDONUCLEASE |
Ama08269 | |
Ama08270 | |
Ama08271 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama08272 | |
Ama08273 | AAA DOMAIN-CONTAINING |
Ama08274 | |
Ama08275 | AAA DOMAIN-CONTAINING |
Ama08276 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama08277 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama08279 | |
Ama08280 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |