The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama08281 | |
Ama08282 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
Ama08283 | CALPONIN |
Ama08284 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama08285 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama08286 | GAF/PUTATIVE CYTOSKELETAL PROTEIN |
Ama08287 | MUTT/NUDIX HYDROLASE |
Ama08288 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama08289 | |
Ama08290 | INHIBITOR OF APOPTOSIS |
Ama08292 | L-CYSTEINE DESULFHYDRASE |
Ama08293 | |
Ama08300 | CTP SYNTHASE |
Ama08302 | |
Ama08304 | UNCHARACTERIZED |
Ama08305 | PROPERDIN |
Ama08306 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama08307 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama08310 | |
Ama08311 | INHIBITOR OF APOPTOSIS |
Ama08315 | INHIBITOR OF APOPTOSIS |
Ama08316 | |
Ama08317 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama08318 | |
Ama08323 | POLYCOMB PROTEIN |
Ama08326 | EPITHELIAL CELL-TRANSFORMING SEQUENCE 2 ONCOGENE-LIKE |
Ama08327 | URIDINE KINASE |
Ama08329 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama08330 | ABC TRANSPORTER DOMAIN-CONTAINING PROTEIN |
Ama08331 | SAP18 |
Ama08332 | ACTIN |
Ama08333 | PROTEIN EVA-1 |
Ama08336 | 60S RIBOSOMAL PROTEIN L24 |
Ama08339 | SER/THR PROTEIN KINASE-TRB |
Ama08342 | RIBOSOMAL PROTEIN L19 |
Ama08344 | |
Ama08345 | ADIPOGENESIS REGULATORY FACTOR |
Ama08346 | |
Ama08349 | CENTROSOMAL PROTEIN CEP126 |
Ama08353 | |
Ama08356 | |
Ama08357 | |
Ama08358 | UNCHARACTERIZED |
Ama08359 | NEUROGENIC PROTEIN MASTERMIND |
Ama08360 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
Ama08361 | SYNAPTOTAGMIN |
Ama08362 | SYNAPTOTAGMIN |
Ama08364 | AGAP008170-PA |
Ama08366 | PUTATIVE-RELATED |
Ama08367 | MONOCARBOXYLATE TRANSPORTER |