The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama08616 | |
Ama08617 | SERINE/THREONINE-PROTEIN KINASE TAO |
Ama08618 | VISUAL SYSTEM HOMEOBOX 2 |
Ama08622 | |
Ama08623 | SERINE/THREONINE-PROTEIN KINASE TAO |
Ama08625 | PLASMINOGEN-RELATED |
Ama08627 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
Ama08628 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
Ama08630 | TRIOKINASE/FMN CYCLASE |
Ama08633 | |
Ama08634 | NANOS PROTEIN |
Ama08635 | PHOSPHOLIPASE D - RELATED |
Ama08636 | NANOS PROTEIN |
Ama08637 | |
Ama08638 | |
Ama08639 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama08640 | NANOS PROTEIN |
Ama08642 | N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED |
Ama08643 | |
Ama08644 | |
Ama08645 | TYROSINE-PROTEIN PHOSPHATASE |
Ama08646 | 26S PROTEASOME REGULATORY SUBUNIT |
Ama08647 | REST COREPRESSOR COREST PROTEIN-RELATED |
Ama08648 | |
Ama08649 | CLATHRIN HEAVY CHAIN RELATED |
Ama08650 | |
Ama08651 | |
Ama08652 | |
Ama08654 | PROTEIN CBG11839-RELATED |
Ama08656 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
Ama08657 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
Ama08658 | |
Ama08659 | DNA POLYMERASE IOTA |
Ama08660 | 60S RIBOSOMAL PROTEIN L24 |
Ama08661 | |
Ama08662 | PUTATIVE-RELATED |
Ama08663 | TELOMERE REPEATS-BINDING BOUQUET FORMATION PROTEIN 2 |
Ama08664 | 28S RIBOSOMAL PROTEIN S36, MITOCHONDRIAL |
Ama08665 | 60S RIBOSOMAL PROTEIN L17 |
Ama08666 | |
Ama08668 | |
Ama08669 | UNCHARACTERIZED |
Ama08673 | SMOOTH MUSCLE MYOSIN HEAVY CHAIN-RELATED |
Ama08675 | SMOOTH MUSCLE MYOSIN HEAVY CHAIN-RELATED |
Ama08676 | SMOOTH MUSCLE MYOSIN HEAVY CHAIN-RELATED |
Ama08677 | |
Ama08678 | SPLICING FACTOR 3B |
Ama08679 | DRAB11-RELATED |
Ama08680 | ABHYDROLASE DOMAIN-CONTAINING PROTEIN |
Ama08681 | OPTIC ATROPHY 3 PROTEIN OPA3 |