The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama08821 | |
Ama08822 | UNCHARACTERIZED |
Ama08823 | DISCS LARGE |
Ama08825 | TYROSINE-PROTEIN KINASE RECEPTOR |
Ama08828 | NUCLEOLUS AND NEURAL PROGENITOR PROTEIN |
Ama08829 | |
Ama08830 | NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER |
Ama08831 | NUCLEAR HORMONE RECEPTOR |
Ama08832 | CARBON CATABOLITE REPRESSOR PROTEIN 4 |
Ama08834 | LP21163P |
Ama08835 | RAN GTPASE-ACTIVATING PROTEIN 1 |
Ama08837 | BLR2807 PROTEIN |
Ama08838 | |
Ama08839 | CYTOCHROME P450 508A4-RELATED |
Ama08840 | |
Ama08841 | |
Ama08842 | RIKEN CDNA D130052B06 GENE |
Ama08843 | BTB/POZ DOMAIN-CONTAINING PROTEIN 9 |
Ama08844 | EQUILIBRATIVE NUCLEOSIDE TRANSPORTER |
Ama08845 | |
Ama08846 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8 |
Ama08847 | MULTIPLE PDZ DOMAIN PROTEIN |
Ama08848 | UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN |
Ama08849 | TRANSPOSON |
Ama08850 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama08851 | |
Ama08853 | CADHERIN-87A |
Ama08855 | HEAT SHOCK PROTEIN 90 FAMILY MEMBER |
Ama08856 | PHOSPHOLIPASE B, PLB1 |
Ama08857 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 15 |
Ama08858 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14 |
Ama08861 | |
Ama08862 | EUKARYOTIC TRANSLATION INITIATION FACTOR |
Ama08863 | KINESIN LIGHT CHAIN |
Ama08864 | TRANSMEMBRANE PROTEIN 179 |
Ama08867 | |
Ama08869 | |
Ama08870 | CALCIUM BINDING PROTEIN |
Ama08871 | MYOSIN LIGHT CHAIN 1, 3 |
Ama08872 | CANCER-RELATED NUCLEOSIDE-TRIPHOSPHATASE |
Ama08873 | - |
Ama08876 | |
Ama08877 | |
Ama08878 | |
Ama08879 | UNCHARACTERIZED |
Ama08880 | UNCHARACTERIZED |
Ama08881 | UNCHARACTERIZED |
Ama08882 | CALCIUM BINDING PROTEIN |
Ama08883 | CALCIUM BINDING PROTEIN |
Ama08884 | OS03G0233200 PROTEIN |