About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama09080G DOMAIN-CONTAINING PROTEIN
Ama09081
Ama09082PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
Ama09083PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
Ama09084TRANSMEMBRANE PROTEIN 179
Ama09085LEUCINE RICH REPEAT FAMILY PROTEIN
Ama09086
Ama09087E3 UBIQUITIN-PROTEIN LIGASE PELLINO-RELATED
Ama09089MYOSIN HEAVY CHAIN - RELATED
Ama09090
Ama09091MYOSIN HEAVY CHAIN - RELATED
Ama09092VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Ama09093MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEIN
Ama09094
Ama09095
Ama09096CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Ama09097POTASSIUM CHANNEL, SUBFAMILY K
Ama09098
Ama09102TRANSPOSABLE ELEMENT-RELATED
Ama09103G DOMAIN-CONTAINING PROTEIN
Ama09104
Ama09105G DOMAIN-CONTAINING PROTEIN
Ama09109G DOMAIN-CONTAINING PROTEIN
Ama09110KRAB DOMAIN C2H2 ZINC FINGER
Ama09111
Ama09112G DOMAIN-CONTAINING PROTEIN
Ama09113BONUS, ISOFORM C-RELATED
Ama09114
Ama09116REVERSE TRANSCRIPTASES
Ama09120PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama09121REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama09122RAN GTPASE-ACTIVATING PROTEIN 1
Ama09123
Ama09124TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT A
Ama09125MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Ama09126PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Ama0912752 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama09128PHOSPHOFURIN ACIDIC CLUSTER SORTING PROTEIN
Ama09130-
Ama09131
Ama09132
Ama09133TRANSMEMBRANE PROTEIN 251
Ama09134ZINC FINGER PROTEIN-LIKE 1
Ama09135B30.2/SPRY DOMAIN-CONTAINING PROTEIN
Ama09136B30.2/SPRY DOMAIN-CONTAINING PROTEIN
Ama09137B30.2/SPRY DOMAIN-CONTAINING PROTEIN
Ama09138B30.2/SPRY DOMAIN-CONTAINING PROTEIN
Ama09139B30.2/SPRY DOMAIN-CONTAINING PROTEIN
Ama09140E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Ama09141B30.2/SPRY DOMAIN-CONTAINING PROTEIN
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