The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama09263 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama09265 | COILED-COIL DOMAIN CONTAINING PROTEIN 9 |
Ama09266 | |
Ama09267 | |
Ama09268 | CYTOSINE DEAMINASE FAMILY MEMBER |
Ama09269 | ENHANCER OF RUDIMENTARY ERH |
Ama09270 | RHO FAMILY GTPASE |
Ama09271 | RHO FAMILY GTPASE |
Ama09272 | ADP RIBOSYLATION FACTOR-RELATED |
Ama09273 | TRANSLATION INITIATION FACTOR EIF3-RELATED |
Ama09274 | |
Ama09275 | KELCH DOMAIN-CONTAINING PROTEIN |
Ama09276 | |
Ama09277 | CARBOXYLESTERASE |
Ama09278 | NEUROLIGIN |
Ama09279 | WD-40 REPEAT PROTEIN |
Ama09281 | |
Ama09282 | TESTIS-SPECIFIC EXPRESSED PROTEIN 55 |
Ama09283 | NUCLEAR EXPORT MEDIATOR FACTOR NEMF |
Ama09284 | |
Ama09285 | |
Ama09286 | MYOSIN |
Ama09288 | ZINC FINGER CONTAINING PROTEIN |
Ama09289 | PROTEIN MEMO1 |
Ama09290 | VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM |
Ama09291 | CALCIUM BINDING PROTEIN |
Ama09292 | |
Ama09294 | AP COMPLEX SUBUNIT MU |
Ama09295 | AP COMPLEX SUBUNIT MU |
Ama09296 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |
Ama09297 | MOLYBDOPTERIN COFACTOR SULFURASE MOSC |
Ama09298 | |
Ama09299 | 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED |
Ama09300 | |
Ama09301 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
Ama09303 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
Ama09304 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
Ama09305 | THAP DOMAIN PROTEIN |
Ama09306 | |
Ama09309 | TRANSPOSABLE ELEMENT-RELATED |
Ama09310 | |
Ama09312 | SUPPRESSOR OF FUSED |
Ama09314 | DIOXYGENASE RV0097-RELATED |
Ama09315 | CCA TRNA NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIAL |
Ama09316 | PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED |
Ama09320 | MYELIN TRANSCRIPTION FACTOR 1-RELATED |
Ama09321 | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED |
Ama09322 | DRAB11-RELATED |
Ama09323 | UNCHARACTERIZED |
Ama09324 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |