The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama09325 | |
Ama09326 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama09327 | THAP DOMAIN PROTEIN |
Ama09329 | D-TYROSYL-TRNA TYR DEACYLASE |
Ama09330 | CLASP |
Ama09331 | |
Ama09332 | CLASP |
Ama09333 | PUTATIVE-RELATED |
Ama09334 | |
Ama09335 | |
Ama09336 | |
Ama09337 | |
Ama09338 | |
Ama09339 | |
Ama09340 | TRANSMEMBRANE PROTEIN 151 HOMOLOG |
Ama09342 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama09343 | CALCIUM BINDING PROTEIN |
Ama09344 | NANOS PROTEIN |
Ama09345 | |
Ama09346 | UNCHARACTERIZED |
Ama09347 | ATAXIN-3-RELATED |
Ama09348 | COILED-COIL DOMAIN-CONTAINING PROTEIN 167 |
Ama09349 | PRESENILIN |
Ama09352 | N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE |
Ama09354 | |
Ama09355 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 29 |
Ama09356 | PYRUVATE CARBOXYLASE |
Ama09357 | PYRUVATE CARBOXYLASE |
Ama09358 | PYRUVATE CARBOXYLASE |
Ama09359 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 |
Ama09360 | UNCHARACTERIZED |
Ama09361 | |
Ama09362 | |
Ama09363 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
Ama09364 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN |
Ama09365 | PUTATIVE-RELATED |
Ama09366 | ATP-DEPENDENT DNA HELICASE |
Ama09367 | THAP DOMAIN PROTEIN |
Ama09368 | |
Ama09373 | |
Ama09374 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama09375 | |
Ama09376 | |
Ama09377 | N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE |
Ama09378 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama09379 | N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE |
Ama09383 | |
Ama09384 | OS10G0105400 PROTEIN |
Ama09385 | OS10G0105400 PROTEIN |
Ama09387 |