The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama09539 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama09540 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama09541 | |
Ama09542 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama09543 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama09545 | |
Ama09546 | AGAP005574-PA |
Ama09547 | TRANSPOSON |
Ama09549 | |
Ama09550 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama09551 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama09552 | |
Ama09553 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Ama09554 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
Ama09555 | |
Ama09556 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
Ama09557 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama09558 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama09559 | THAP DOMAIN PROTEIN |
Ama09560 | |
Ama09561 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama09562 | |
Ama09563 | ATP-DEPENDENT DNA HELICASE |
Ama09564 | PIKACHURIN-LIKE PROTEIN |
Ama09568 | PIKACHURIN-LIKE PROTEIN |
Ama09569 | TRANSPOSON |
Ama09570 | PIKACHURIN-LIKE PROTEIN |
Ama09571 | UNCHARACTERIZED |
Ama09572 | MYOSIN REGULATORY LIGHT CHAIN 2 |
Ama09573 | |
Ama09575 | ZINC FINGER PROTEIN |
Ama09576 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama09577 | |
Ama09578 | |
Ama09579 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN |
Ama09582 | - |
Ama09583 | UNCHARACTERIZED |
Ama09584 | |
Ama09585 | |
Ama09586 | |
Ama09587 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09588 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09589 | |
Ama09590 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09591 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09592 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09593 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09594 | |
Ama09595 | |
Ama09596 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |