The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama09766 | PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT H |
Ama09767 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama09768 | SOLUTE CARRIER FAMILY 35 MEMBER B |
Ama09772 | PROTEASOME SUBUNIT ALPHA/BETA |
Ama09773 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
Ama09775 | |
Ama09776 | |
Ama09777 | DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED |
Ama09779 | ZINC FINGER PROTEIN 839 |
Ama09780 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09781 | ZINC FINGER PROTEIN 839 |
Ama09782 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama09783 | SEC10 |
Ama09784 | BROMO ADJACENT HOMOLOGY DOMAIN-CONTAINING 1 PROTEIN |
Ama09786 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Ama09788 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Ama09790 | |
Ama09792 | |
Ama09793 | FERM DOMAIN (PROTEIN4.1-EZRIN-RADIXIN-MOESIN) FAMILY |
Ama09794 | FERM DOMAIN (PROTEIN4.1-EZRIN-RADIXIN-MOESIN) FAMILY |
Ama09795 | KELCH PROTEIN |
Ama09797 | THADA/DEATH RECEPTOR INTERACTING PROTEIN |
Ama09798 | |
Ama09801 | PROTEIN CBG26694 |
Ama09803 | |
Ama09805 | L-ASPARAGINASE |
Ama09806 | PROTEIN TRANSPORT PROTEIN SEC23 |
Ama09808 | EG:114D9.1 PROTEIN-RELATED |
Ama09809 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama09810 | COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 30 |
Ama09812 | SPLICING FACTOR SF3A-RELATED |
Ama09813 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
Ama09814 | ATP-DEPENDENT DNA HELICASE |
Ama09815 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
Ama09816 | |
Ama09817 | CRUMBS FAMILY MEMBER |
Ama09818 | |
Ama09819 | PUTATIVE-RELATED |
Ama09820 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama09821 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama09822 | |
Ama09825 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
Ama09828 | PUTATIVE-RELATED |
Ama09830 | |
Ama09831 | WD REPEAT-CONTAINING PROTEIN 81 |
Ama09832 | DNA LIGASE |
Ama09833 | |
Ama09834 | |
Ama09835 | 5'->3' EXORIBONUCLEASE |
Ama09836 | 5'->3' EXORIBONUCLEASE |