The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama09473 | PUTATIVE-RELATED |
Ama09474 | SESQUIPEDALIAN |
Ama09475 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
Ama09476 | |
Ama09477 | |
Ama09478 | TATA-BOX BINDING PROTEIN |
Ama09479 | |
Ama09480 | |
Ama09481 | TATA-BOX BINDING PROTEIN |
Ama09482 | |
Ama09483 | |
Ama09484 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama09485 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
Ama09490 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama09491 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama09492 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09493 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Ama09494 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama09495 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09496 | ATP-DEPENDENT DNA HELICASE |
Ama09497 | |
Ama09498 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama09500 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09501 | |
Ama09502 | |
Ama09503 | NEUROPEPTIDE Y RECEPTOR |
Ama09504 | |
Ama09506 | PUTATIVE-RELATED |
Ama09507 | |
Ama09508 | PEPTIDASE |
Ama09509 | PEPTIDASE |
Ama09510 | TRANSPOSON |
Ama09512 | THAP DOMAIN PROTEIN |
Ama09513 | PUTATIVE-RELATED |
Ama09514 | TRANSPOSON |
Ama09515 | |
Ama09516 | |
Ama09517 | |
Ama09519 | |
Ama09524 | |
Ama09526 | MYOSIN LIGHT CHAIN 1, 3 |
Ama09527 | THAP DOMAIN PROTEIN |
Ama09528 | |
Ama09529 | MITOGEN-ACTIVATED PROTEIN KINASE-BINDING PROTEIN 1 |
Ama09532 | |
Ama09533 | |
Ama09534 | |
Ama09535 | |
Ama09537 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09538 |