The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama10030 | SYNAPTOTAGMIN |
Ama10031 | BARDET-BIEDL SYNDROME 1 PROTEIN |
Ama10032 | PUTATIVE-RELATED |
Ama10033 | 40S RIBOSOMAL PROTEIN S29 |
Ama10034 | LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 |
Ama10035 | ERYTHROID DIFFERENTIATION-RELATED FACTOR 1 |
Ama10037 | |
Ama10038 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
Ama10039 | |
Ama10040 | NARDILYSIN |
Ama10041 | PROTEIN DISPATCHED-RELATED |
Ama10042 | OPTIC ATROPHY 3 PROTEIN OPA3 |
Ama10044 | |
Ama10045 | |
Ama10046 | INHIBITOR OF APOPTOSIS |
Ama10047 | |
Ama10048 | |
Ama10049 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama10050 | THAP DOMAIN PROTEIN |
Ama10051 | GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN |
Ama10052 | - |
Ama10053 | |
Ama10054 | |
Ama10055 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama10056 | UNCHARACTERIZED |
Ama10058 | UNCHARACTERIZED |
Ama10059 | UNCHARACTERIZED |
Ama10060 | SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3 |
Ama10061 | |
Ama10064 | POLY A POLYMERASE |
Ama10065 | ISTHMIN-2 |
Ama10071 | HEDGEHOG-INTERACTING PROTEIN |
Ama10072 | CALCIUM BINDING PROTEIN |
Ama10073 | CALCIUM BINDING PROTEIN |
Ama10074 | |
Ama10075 | |
Ama10076 | EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN |
Ama10077 | MYOSIN REGULATORY LIGHT CHAIN 2 |
Ama10078 | |
Ama10079 | |
Ama10081 | |
Ama10082 | L-ASPARAGINASE |
Ama10083 | MYOSIN LIGHT CHAIN 1, 3 |
Ama10084 | |
Ama10085 | PROLYL HYDROXYLASE-RELATED |
Ama10086 | 80 KDA MCM3-ASSOCIATED PROTEIN |
Ama10087 | TRANSPOSABLE ELEMENT-RELATED |
Ama10090 | |
Ama10103 | |
Ama10106 |