The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama10398 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER |
Ama10399 | |
Ama103_5db7b01a | TRANSLATION INITIATION FACTOR-RELATED |
Ama10400 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
Ama10401 | SLR1441 PROTEIN |
Ama10403 | REST COREPRESSOR COREST PROTEIN-RELATED |
Ama10405 | RIBOSOMAL PROTEIN S6 KINASE |
Ama10408 | |
Ama10409 | HOOK PROTEINS |
Ama10410 | UNCHARACTERIZED |
Ama10412 | |
Ama10413 | |
Ama10415 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
Ama10416 | |
Ama10417 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama10418 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama10420 | CELL DIVISION CYCLE ASSOCIATED PROTEIN 4/SERTA DOMAIN-CONTAINING PROTEIN 2 |
Ama10422 | TRYPTOPHANYL-TRNA SYNTHETASE |
Ama10423 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
Ama10424 | TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN |
Ama10425 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Ama10426 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Ama10427 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Ama10428 | G PROTEIN-COUPLED RECEPTOR |
Ama10429 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Ama10430 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Ama10431 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Ama10432 | |
Ama10433 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Ama10434 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Ama10435 | BACILLOLYSIN |
Ama10436 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama10437 | BACILLOLYSIN |
Ama10439 | BACILLOLYSIN |
Ama10440 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama10441 | BACILLOLYSIN |
Ama10442 | BACILLOLYSIN |
Ama10443 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama10444 | BACILLOLYSIN |
Ama10445 | ZGC:174356 |
Ama10446 | |
Ama10447 | |
Ama10449 | |
Ama10450 | |
Ama10451 | EGL NINE HOMOLOG-RELATED |
Ama10452 | TPR REPEAT CONTAINING PROTEIN |
Ama10455 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama10456 | GH11867P |
Ama10458 | |
Ama10459 | N-ACETYLGALACTOSAMINYLTRANSFERASE |