The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama10732 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama10733 | ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN |
Ama10737 | |
Ama10739 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama10740 | INHIBITOR OF APOPTOSIS |
Ama10741 | |
Ama10743 | PUTATIVE-RELATED |
Ama10745 | |
Ama10746 | |
Ama10747 | CARBOHYDRATE SULFOTRANSFERASE |
Ama10749 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama10752 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
Ama10753 | ATP-DEPENDENT RNA HELICASE |
Ama10754 | THAP DOMAIN PROTEIN |
Ama10755 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama10758 | |
Ama10759 | |
Ama10760 | ENDO-1,4-BETA-GLUCANASE |
Ama10761 | ENDO-1,4-BETA-GLUCANASE |
Ama10762 | ENDO-1,4-BETA-GLUCANASE |
Ama10763 | NEURALIZED |
Ama10767 | |
Ama10768 | METALLOPHOSPHOESTERASE |
Ama10769 | NADH DEHYDROGENASE |
Ama10770 | TRANSPOSABLE ELEMENT-RELATED |
Ama10771 | ZINC FINGER PROTEIN |
Ama10772 | CCAAT-BINDING FACTOR-RELATED |
Ama10773 | |
Ama10775 | |
Ama10776 | CALPAIN |
Ama10777 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama10778 | CALPAIN |
Ama10780 | |
Ama10781 | |
Ama10783 | |
Ama10784 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama10785 | BTB/POZ DOMAIN-CONTAINING |
Ama10786 | PARANEOPLASTIC ANTIGEN |
Ama10787 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
Ama10788 | TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X |
Ama10789 | CALCIUM BINDING PROTEIN |
Ama10790 | EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN |
Ama10791 | KUNITZ-TYPE PROTEASE INHIBITOR-RELATED |
Ama10793 | CALPAIN |
Ama10794 | ADP-RIBOSYLGLYCOHYDROLASE |
Ama10795 | ADP-RIBOSYLGLYCOHYDROLASE |
Ama10796 | OSJNBA0013A04.12 PROTEIN |
Ama10797 | ADP-RIBOSYLGLYCOHYDROLASE |
Ama10798 | |
Ama10799 | ADP-RIBOSYLGLYCOHYDROLASE |