The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama10935 | |
Ama10936 | DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT |
Ama10937 | |
Ama10939 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
Ama10940 | |
Ama10941 | FLAP ENDONUCLEASE FAMILY MEMBER |
Ama10942 | GOLGI MEMBRANE PROTEIN YIP1 |
Ama10944 | KELCH PROTEIN |
Ama10945 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Ama10946 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 1 |
Ama10947 | |
Ama10948 | ACTIN |
Ama10949 | ACTIN |
Ama10952 | TWO PORE CHANNEL 3 |
Ama10953 | SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT |
Ama10955 | MYOSIN LIGHT CHAIN 1, 3 |
Ama10956 | UNCHARACTERIZED |
Ama10957 | |
Ama10958 | |
Ama10959 | B-CELL LYMPHOMA/LEUKEMIA 11 |
Ama10961 | |
Ama10962 | |
Ama10965 | |
Ama10966 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama10967 | |
Ama10968 | |
Ama10970 | ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN 26 |
Ama10971 | ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN 26 |
Ama10972 | CAMK FAMILY PROTEIN KINASE |
Ama10973 | |
Ama10974 | B9 DOMAIN-CONTAINING |
Ama10975 | UNCHARACTERIZED |
Ama10978 | |
Ama10979 | INTEGRAL MEMBRANE PROTEIN GPR137 |
Ama10980 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama10981 | INHIBITOR OF APOPTOSIS |
Ama10982 | |
Ama10983 | |
Ama10984 | INTRAFLAGELLAR TRANSPORT PROTEIN 43 HOMOLOG |
Ama10986 | UNCHARACTERIZED |
Ama10987 | SIMILAR TO HYPOTHETICAL PROTEIN FLJ40298 |
Ama10988 | CENTROMERE/KINETOCHORE PROTEIN ZW10 |
Ama10989 | |
Ama10995 | ENDOPLASMIC RETICULUM MEMBRANE-ASSOCIATED RNA DEGRADATION PROTEIN |
Ama10996 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
Ama10997 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
Ama10998 | G-PROTEIN COUPLED RECEPTOR |
Ama10999 | ARPIN |
Ama109_5db7b01a | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama10_5db7b01a | MYCBP-ASSOCIATED PROTEIN |