The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama10861 | ACYL-COA DESATURASE |
Ama10863 | PLAKOPHILLIN-RELATED |
Ama10864 | PUTATIVE-RELATED |
Ama10865 | DENN DOMAIN-CONTAINING PROTEIN 2 |
Ama10866 | PUTATIVE-RELATED |
Ama10867 | KREV INTERACTION TRAPPED 1-RELATED |
Ama10871 | ADHESIN, PUTATIVE-RELATED |
Ama10873 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama10874 | |
Ama10875 | LD09343P |
Ama10876 | LD09343P |
Ama10877 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama10878 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama10879 | |
Ama10882 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1 |
Ama10883 | ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED |
Ama10884 | ALPHA-AMYLASE FAMILY MEMBER |
Ama10885 | RIBONUCLEASE P_MRP PROTEIN SUBUNIT POP5 |
Ama10887 | |
Ama10888 | G PROTEIN-COUPLED RECEPTOR |
Ama10889 | |
Ama10890 | OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR |
Ama10891 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 61 |
Ama10893 | - |
Ama10894 | |
Ama10895 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
Ama108_5db7b01a | |
Ama10903 | |
Ama10904 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama10905 | INTERFERON-INDUCIBLE GTPASE |
Ama10906 | ZINC FINGER PROTEIN |
Ama10908 | |
Ama10909 | BLR2807 PROTEIN |
Ama10910 | CYSTATIN FAMILY MEMBER |
Ama10911 | COILED-COIL DOMAIN-CONTAINING 166 |
Ama10912 | YALI0E18722P |
Ama10913 | |
Ama10914 | POTASSIUM CHANNEL, SUBFAMILY K |
Ama10915 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Ama10916 | |
Ama10917 | YNEIN REGULATORY COMPLEX SUBUNIT 5 |
Ama10918 | |
Ama10921 | CCCH ZINC FINGER/TIS11-RELATED |
Ama10923 | |
Ama10924 | TEX261 PROTEIN |
Ama10925 | PUTATIVE-RELATED |
Ama10926 | |
Ama10927 | AP-5 COMPLEX SUBUNIT MU-1 |
Ama10932 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
Ama10934 | G-PROTEIN COUPLED RECEPTOR |