The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama11361 | ORGANIC SOLUTE TRANSPORTER-RELATED |
Ama11362 | SI:DKEY-19B23.12-RELATED |
Ama11363 | |
Ama11364 | CALCIUM BINDING PROTEINS |
Ama11365 | |
Ama11366 | D-XYLOSE-PROTON SYMPORTER-LIKE 2 |
Ama11367 | |
Ama11368 | WD-REPEAT PROTEIN 18 |
Ama11369 | UPF0600 PROTEIN C5ORF51 |
Ama11370 | NETRIN/LAMININ-RELATED |
Ama11372 | RNA 2',3'-CYCLIC PHOSPHODIESTERASE |
Ama11373 | |
Ama11375 | |
Ama11376 | |
Ama11377 | |
Ama11378 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama11379 | |
Ama11380 | FIBROUS SHEATH CABYR-BINDING PROTEIN |
Ama11382 | |
Ama11383 | |
Ama11384 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama11385 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama11386 | |
Ama11387 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
Ama11389 | TOLL-LIKE RECEPTOR |
Ama11390 | AGAP008810-PA |
Ama11391 | VITELLOGENIN-RELATED |
Ama11392 | IRON-SULFUR CLUSTER ASSEMBLY PROTEIN |
Ama11393 | AGAP008810-PA |
Ama11394 | VITELLOGENIN-RELATED |
Ama11395 | INHIBITOR OF APOPTOSIS |
Ama11396 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama11397 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11398 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11399 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama113_5db7b01a | BONUS, ISOFORM C-RELATED |
Ama11400 | PROTEIN CBG20824 |
Ama11401 | PROTEIN CBG20824 |
Ama11402 | DNA POLYMERASE |
Ama11404 | GLYCOGEN DEBRANCHING ENZYME |
Ama11405 | IFT140/172-RELATED |
Ama11406 | E3 UBIQUITIN-PROTEIN LIGASE TOPORS |
Ama11407 | IFT140/172-RELATED |
Ama11408 | UNCHARACTERIZED |
Ama11411 | GLYCOGEN DEBRANCHING ENZYME |
Ama11412 | GLYCOGEN DEBRANCHING ENZYME |
Ama11413 | GLYCOGEN DEBRANCHING ENZYME |
Ama11414 | E3 UBIQUITIN-PROTEIN LIGASE TOPORS |
Ama11415 | UNCHARACTERIZED |
Ama11416 | - |