The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama11277 | |
Ama11278 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11279 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11280 | |
Ama11281 | COILED-COIL DOMAIN-CONTAINING PROTEIN 189 |
Ama11282 | RETINITIS PIGMENTOSA 1 PROTEIN |
Ama11283 | PROTEIN CBG12474 |
Ama11295 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11296 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama11298 | |
Ama112_5db7b01a | CT120 PROTEIN |
Ama11303 | |
Ama11304 | |
Ama11305 | |
Ama11311 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama11313 | |
Ama11314 | |
Ama11318 | |
Ama11320 | POL PROTEIN |
Ama11321 | 3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE |
Ama11322 | |
Ama11323 | PUTATIVE-RELATED |
Ama11324 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama11325 | LIPASE |
Ama11328 | REGULATOR OF G PROTEIN SIGNALING |
Ama11329 | |
Ama11330 | |
Ama11331 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11332 | |
Ama11333 | VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL |
Ama11334 | BCL-2 RELATED |
Ama11336 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama11337 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama11338 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama11340 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama11341 | MENORIN (DENDRITIC BRANCHING PROTEIN) |
Ama11342 | ACETYL-COA C-ACETYLTRANSFERASE |
Ama11344 | NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED |
Ama11345 | |
Ama11346 | DNA REPAIR ENDONUCLEASE XPF |
Ama11347 | GLYCOSYL TRANSFERASE-RELATED |
Ama11348 | |
Ama11349 | |
Ama11350 | |
Ama11351 | POLY A POLYMERASE CID PAP -RELATED |
Ama11352 | |
Ama11353 | THIOPURINE S-METHYLTRANSFERASE |
Ama11356 | |
Ama11358 | ORGANIC SOLUTE TRANSPORTER-RELATED |
Ama11360 | CADHERIN DOMAIN-CONTAINING PROTEIN |