The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama11761 | METHYLTRANSFERASE, FKBM FAMILY PROTEIN |
Ama11762 | 4.1 G PROTEIN |
Ama11764 | |
Ama11770 | UNCHARACTERIZED |
Ama11771 | NEUROLIGIN |
Ama11782 | HEPARAN SULFATE SULFOTRANSFERASE |
Ama11788 | 40S RIBOSOMAL PROTEIN S12 |
Ama11789 | TESTIS-EXPRESSED PROTEIN 43 |
Ama11790 | CALCIUM BINDING PROTEINS |
Ama11791 | |
Ama11792 | CYTOKINE RECEPTOR |
Ama11793 | DOMON DOMAIN-CONTAINING PROTEIN FRRS1L |
Ama11794 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
Ama11795 | SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG |
Ama11796 | HEPARAN SULFATE SULFOTRANSFERASE |
Ama11797 | HEPARAN SULFATE SULFOTRANSFERASE |
Ama11798 | KETOACID-COENZYME A TRANSFERASE |
Ama117_5db7b01a | PDF RECEPTOR-LIKE PROTEIN-RELATED |
Ama11800 | CENTROSOMAL PROTEIN-RELATED |
Ama11804 | DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
Ama11805 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 |
Ama11806 | |
Ama11807 | SPERMATHECAL PHYSIOLOGY VARIANT |
Ama11808 | |
Ama11809 | CHROMOSOME 10, WHOLE GENOME SHOTGUN SEQUENCE |
Ama11810 | BLR6086 PROTEIN |
Ama11811 | CELL DEATH ACTIVATOR CIDE |
Ama11812 | BLR6086 PROTEIN |
Ama11813 | RHO FAMILY GTPASE |
Ama11814 | |
Ama11815 | DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN |
Ama11816 | |
Ama11817 | TRANSPOSABLE ELEMENT-RELATED |
Ama11818 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama11819 | - |
Ama11822 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama11824 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
Ama11825 | N-LINKED OLIGOSACCHARIDE PROCESSING |
Ama11826 | SERINE/THREONINE PROTEIN KINASE |
Ama11827 | AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED |
Ama11828 | ENOYL-COA HYDRATASE-RELATED |
Ama11829 | ELONGIN-C |
Ama11830 | NEURENSIN 1-RELATED |
Ama11831 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama11832 | PROTEIN STPG4 |
Ama11833 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN |
Ama11834 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
Ama11835 | DEK PROTEIN |
Ama11836 | ACETYL-COENZYME A SYNTHETASE |
Ama11837 | ACETYL-COENZYME A SYNTHETASE |