The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama11838 | ACETYL-COENZYME A SYNTHETASE |
Ama11839 | S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED |
Ama11841 | LEUCOKININ RECEPTOR-RELATED |
Ama11843 | RIKEN CDNA D130052B06 GENE |
Ama11844 | LAMIN DM0-RELATED |
Ama11845 | SI:CH73-193C12.2-RELATED |
Ama11846 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama11847 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama11848 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama11849 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 |
Ama11850 | 40S RIBOSOMAL PROTEIN S21 |
Ama11851 | |
Ama11852 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11853 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11857 | T4-TYPE LYSOZYME 1-RELATED |
Ama11858 | MITOGEN-ACTIVATED PROTEIN KINASE |
Ama11859 | |
Ama11860 | UNCHARACTERIZED |
Ama11861 | |
Ama11862 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11864 | |
Ama11865 | IMPORTIN-7, 8, 11 |
Ama11866 | TRANSPOSABLE ELEMENT-RELATED |
Ama11867 | ZINC FINGER PROTEIN |
Ama11868 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
Ama11869 | KICSTOR COMPLEX PROTEIN SZT2 |
Ama11871 | KICSTOR COMPLEX PROTEIN SZT2 |
Ama11872 | KICSTOR COMPLEX PROTEIN SZT2 |
Ama11873 | KICSTOR COMPLEX PROTEIN SZT2 |
Ama11874 | YL-1 PROTEIN TRANSCRIPTION FACTOR-LIKE 1 |
Ama11875 | TRANSMEMBRANE PROTEIN CCDC163 |
Ama11876 | |
Ama11877 | REVERSE TRANSCRIPTASES |
Ama11878 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama11880 | |
Ama11881 | G-PROTEIN COUPLED RECEPTOR |
Ama11882 | G-PROTEIN COUPLED RECEPTOR |
Ama11883 | |
Ama11884 | PROTEIN FAM91A1 |
Ama11885 | |
Ama11886 | - |
Ama11887 | CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) |
Ama11888 | DIPHTHAMIDE BIOSYNTHESIS PROTEIN |
Ama11889 | REGULATOR OF G-PROTEIN SIGNALING 22 |
Ama11891 | |
Ama11892 | |
Ama11893 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
Ama11894 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
Ama11896 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
Ama11897 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |