About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361 Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama11960
Ama11961TYROSINE-PROTEIN KINASE RECEPTOR
Ama11964PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama11967-
Ama11969VALYL-TRNA SYNTHETASES
Ama11970MICROSOMAL PROSTAGLANDIN E SYNTHASE-2
Ama11971BAG FAMILY MOLECULAR CHAPERONE REGULATOR 2
Ama11972UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Ama11973PROPERDIN
Ama11975PROPERDIN
Ama11976
Ama11977ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Ama11978G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
Ama11979
Ama11980AMINO ACID TRANSPORTER
Ama11981REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama11982UNCHARACTERIZED
Ama11983CALCIUM BINDING PROTEINS
Ama11985DUF853 DOMAIN-CONTAINING PROTEIN
Ama11987SLEI FAMILY PROTEIN
Ama11990METHYLTRANSFERASE
Ama11991PUTATIVE-RELATED
Ama11993TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
Ama11994
Ama11995PROTEIN CBG26694
Ama11996
Ama11998REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama11999
Ama119_5db7b01aELONGATION FACTOR 1 ALPHA
Ama11_5db84494MULTIPLE PDZ DOMAIN PROTEIN
Ama12000
Ama12001SOLUTE CARRIER FAMILY 40 MEMBER
Ama12002AGAP008005-PA
Ama12003DUF614 FAMILY PROTEIN-RELATED
Ama12007SNF2/RAD54 HELICASE FAMILY
Ama12008SPINDLE AND CENTRIOLE ASSOCIATED PROTEIN 1 SPICE1
Ama12009
Ama12010SIGNAL PEPTIDE PEPTIDASE
Ama12011GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEINS-INTERACTING PROTEIN 1 GADD45GIP1
Ama12012OS11G0677101 PROTEIN
Ama12013METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE
Ama12016CALCIUM BINDING PROTEINS
Ama12018PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
Ama12019SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS
Ama12020CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
Ama12021
Ama12022
Ama12023
Ama12025CENTROSOME SPINDLE POLE ASSOCIATED PROTEIN
Ama12026PROLACTIN REGULATORY ELEMENT BINDING PROTEIN
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