The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama12158 | |
Ama12159 | |
Ama12160 | FI21293P1 |
Ama12161 | UNCHARACTERIZED |
Ama12162 | WD-REPEAT PROTEIN |
Ama12163 | |
Ama12164 | |
Ama12165 | MYELIN TRANSCRIPTION FACTOR 1-RELATED |
Ama12166 | MYELIN TRANSCRIPTION FACTOR 1-RELATED |
Ama12167 | PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE |
Ama12168 | POLYCOMB GROUP PROTEIN |
Ama12170 | |
Ama12171 | MITOGEN-ACTIVATED PROTEIN KINASE |
Ama12172 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
Ama12173 | NEURALIZED |
Ama12175 | DISCS LARGE |
Ama12176 | DISCS LARGE |
Ama12177 | |
Ama12178 | REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN |
Ama12179 | GLYCOSYLTRANSFERASE |
Ama12180 | |
Ama12181 | SNF2/RAD54 FAMILY MEMBER |
Ama12182 | REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN |
Ama12183 | |
Ama12185 | CUBILIN-LIKE PROTEIN |
Ama12186 | |
Ama12187 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama12188 | BETA TRANSDUCIN-RELATED PROTEIN |
Ama12190 | BETA TRANSDUCIN-RELATED PROTEIN |
Ama12191 | BETA TRANSDUCIN-RELATED PROTEIN |
Ama12192 | |
Ama12194 | LD44762P |
Ama12195 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama12196 | |
Ama12197 | ISOMERASE |
Ama12198 | ISOMERASE |
Ama12201 | E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED |
Ama12203 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama12204 | |
Ama12205 | ZINC FINGER PROTEIN |
Ama12206 | |
Ama12207 | BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 1 |
Ama12208 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama12209 | VERTNIN |
Ama12211 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama12212 | |
Ama12213 | ACTIN |
Ama12214 | ACTIN |
Ama12215 | ACTIN |
Ama12216 | ACTIN |