The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama12217 | DEP DOMAIN-CONTAINING |
Ama12218 | |
Ama12219 | SULFOTRANSFERASE SULT |
Ama12220 | BETA TRANSDUCIN-RELATED PROTEIN |
Ama12221 | PHOSPHOLIPID SCRAMBLASE-RELATED |
Ama12222 | PHOSPHOLIPID SCRAMBLASE-RELATED |
Ama12224 | ARSENITE METHYLTRANSFERASE |
Ama12225 | TRIFUNCTIONAL ENZYME SUBUNIT ALPHA |
Ama12226 | ACETYL-COA C-ACYLTRANSFERASE |
Ama12227 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama12229 | AAA DOMAIN-CONTAINING |
Ama12230 | |
Ama12231 | |
Ama12232 | MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE |
Ama12233 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
Ama12234 | |
Ama12237 | RADIAL SPOKE HEAD 10 HOMOLOG B-RELATED |
Ama12238 | |
Ama12239 | |
Ama12243 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama12247 | |
Ama12248 | |
Ama12249 | 24-DEHYDROCHOLESTEROL REDUCTASE |
Ama12251 | |
Ama12258 | |
Ama12259 | |
Ama12262 | - |
Ama12263 | - |
Ama12264 | - |
Ama12266 | - |
Ama12268 | |
Ama12269 | S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE |
Ama12270 | TRANSMEMBRANE PROTEIN 106B |
Ama12271 | |
Ama12272 | |
Ama12274 | SMALL INTEGRAL MEMBRANE PROTEIN 15 |
Ama12275 | |
Ama12277 | AP COMPLEX SUBUNIT MU |
Ama12280 | DELTA ADAPTIN-RELATED |
Ama12283 | PUTATIVE-RELATED |
Ama12284 | UNCHARACTERIZED |
Ama12285 | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 |
Ama12287 | |
Ama12288 | ACTIN |
Ama12289 | GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEIN GADD45 |
Ama12291 | |
Ama12292 | SNF2/RAD54 FAMILY MEMBER |
Ama12297 | HISTONE H3 METHYLTRANSFERASE |
Ama12298 | PROTEIN CBG05131 |
Ama12299 |