About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361 Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama12501EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama12502INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN
Ama12503ANNEXIN
Ama12504
Ama12505OXIDATIVE STRESS-RESPONSE SERINE-RICH PROTEIN 1
Ama12506EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E
Ama12507UNCHARACTERIZED
Ama12508CYCLINS
Ama12509RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama12510RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama12511INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Ama12512
Ama12514PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED
Ama12515LD24721P
Ama12516XPA-BINDING PROTEIN 1-RELATED
Ama12517
Ama12518
Ama12519REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama12520ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE
Ama12521KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Ama12522RWD DOMAIN-CONTAINING PROTEIN 3
Ama12523ETHANOLAMINEPHOSPHOTRANSFERASE
Ama12524DEP DOMAIN PROTEIN
Ama12525
Ama12526GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Ama12527RADICAL SAM PROTEINS
Ama12529STATHMIN
Ama12530
Ama12531DOLICHYL GLYCOSYLTRANSFERASE
Ama12535DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
Ama12536BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Ama12537
Ama12539
Ama12540SPHINGOMYELIN PHOSPHODIESTERASE
Ama12541
Ama12543
Ama12544TRANSCRIPTION FACTOR AP-2
Ama1254552 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama12546-
Ama12547TOLL-LIKE RECEPTOR
Ama12549LIPASE
Ama12550CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama12551CYTOKINE RECEPTOR
Ama12553U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A
Ama12554HILLARIN
Ama12559SIMILAR TO HYPOTHETICAL PROTEIN MGC34837
Ama12560DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]
Ama12561F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED
Ama12562ZINC FINGER, ZZ TYPE
Ama12563PHOSPHATIDYLINOSITOL GLYCAN-RELATED
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