The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama14189 | DNA2/NAM7 HELICASE FAMILY |
Ama14190 | |
Ama14191 | |
Ama14192 | SULFOTRANSFERASE SULT |
Ama14193 | |
Ama14194 | |
Ama14195 | PROTEASOME SUBUNIT ALPHA/BETA |
Ama14196 | RNA BINDING MOTIF RBM PROTEIN -RELATED |
Ama14197 | - |
Ama14198 | - |
Ama14199 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 |
Ama14200 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama14201 | SLEI FAMILY PROTEIN |
Ama14204 | |
Ama14205 | TRANSPOSON |
Ama14206 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama14207 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama14208 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama14209 | |
Ama14210 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama14214 | |
Ama14215 | |
Ama14218 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
Ama14221 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama14223 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
Ama14225 | COILED-COIL DOMAIN-CONTAINING PROTEIN 13 |
Ama14227 | DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN |
Ama14229 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama14230 | |
Ama14231 | RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN |
Ama14234 | TENASCIN |
Ama14236 | |
Ama14237 | |
Ama14238 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama14240 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H |
Ama14243 | PALMITOYLTRANSFERASE ZDHHC16 |
Ama14244 | DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED |
Ama14247 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama14248 | |
Ama14251 | OVOCHYMASE-RELATED |
Ama14252 | OVOCHYMASE-RELATED |
Ama14253 | OVOCHYMASE-RELATED |
Ama14254 | |
Ama14256 | OVOCHYMASE-RELATED |
Ama14257 | MOTOR NEURON AND PANCREAS HOMEOBOX PROTEIN |
Ama14261 | |
Ama14262 | |
Ama14263 | - |
Ama14267 | |
Ama14268 |