The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama14614 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama14615 | |
Ama14616 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama14617 | THAP DOMAIN PROTEIN |
Ama14618 | |
Ama14620 | |
Ama14622 | |
Ama14623 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
Ama14624 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama14625 | ZINC FINGER PROTEIN |
Ama14626 | |
Ama14627 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama14632 | STRAWBERRY NOTCH-RELATED |
Ama14633 | BETA-MANNOSIDASE |
Ama14644 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama14645 | PUTATIVE-RELATED |
Ama14646 | HOMOLOGOUS TO DROSOPHILA SQD (SQUID) PROTEIN |
Ama14647 | |
Ama14648 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama14649 | FI19922P1-RELATED |
Ama14651 | GATA ZINC FINGER DOMAIN-CONTAINING |
Ama14652 | ATP-DEPENDENT DNA HELICASE |
Ama14653 | |
Ama14654 | |
Ama14655 | |
Ama14656 | HEXAMETHYLENE BISACETAMIDE INDUCIBLE 1 |
Ama14657 | - |
Ama14658 | METABOTROPIC GLUTAMATE RECEPTOR |
Ama14659 | N-LYSINE METHYLTRANSFERASE KMT5A |
Ama14660 | HYDROLETHALUS SYNDROME PROTEIN 1 |
Ama14661 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama14662 | BCL2-ASSOCIATED ATHANOGENE |
Ama14663 | SOLUTE CARRIER FAMILY 17 |
Ama14665 | |
Ama14666 | |
Ama14667 | PCD6 INTERACTING PROTEIN-RELATED |
Ama14669 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama14670 | |
Ama14671 | |
Ama14672 | PROTEIN CBG10425 |
Ama14673 | |
Ama14674 | |
Ama14675 | TATA-BOX BINDING PROTEIN |
Ama14676 | INHIBITOR OF APOPTOSIS |
Ama14678 | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT |
Ama14679 | TRANSPOSON |
Ama14680 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama14681 | |
Ama14682 | SEGMENTATION PROTEIN EVEN-SKIPPED |
Ama14683 | SEGMENTATION PROTEIN EVEN-SKIPPED |