The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama14833 | SOLUTE CARRIER FAMILY 39 |
Ama14835 | |
Ama14836 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
Ama14837 | ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2 |
Ama14838 | ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2 |
Ama14840 | UNCHARACTERIZED |
Ama14841 | NISCHARIN RELATED |
Ama14849 | |
Ama14851 | |
Ama14853 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama14854 | UNCHARACTERIZED |
Ama14855 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
Ama14856 | UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN |
Ama14857 | |
Ama14858 | |
Ama14859 | |
Ama14860 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama14861 | |
Ama14862 | |
Ama14863 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama14864 | |
Ama14866 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama14867 | THAP DOMAIN PROTEIN |
Ama14868 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama14869 | PUTATIVE-RELATED |
Ama14870 | |
Ama14871 | |
Ama14872 | |
Ama14873 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama14874 | |
Ama14875 | |
Ama14876 | VACUOLAR PROTEIN SORTING VPS16 |
Ama14877 | VACUOLAR PROTEIN SORTING VPS16 |
Ama14879 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
Ama14880 | |
Ama14881 | ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT |
Ama14882 | |
Ama14885 | CHITIN SYNTHASE |
Ama14886 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama14887 | ZINC FINGER PROTEIN 183 |
Ama14888 | |
Ama14889 | KUNITZ-TYPE PROTEASE INHIBITOR-RELATED |
Ama14890 | |
Ama14892 | |
Ama14893 | |
Ama14894 | SYNAPTOTAGMIN |
Ama14895 | - |
Ama14898 | |
Ama14899 | |
Ama14900 |