The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama15040 | PROTEIN SEL-1 HOMOLOG 3 |
Ama15041 | |
Ama15042 | |
Ama15043 | PROTEIN FMP42 |
Ama15044 | RADIAL SPOKE HEAD 1 HOMOLOG |
Ama15045 | UNCHARACTERIZED |
Ama15046 | ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL |
Ama15047 | ETS |
Ama15050 | T-CELL ACUTE LYMPHOCYTIC LEUKEMIA/STEM CELL LEUKEMIA-RELATED |
Ama15051 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama15052 | SKICH DOMAIN-CONTAINING PROTEIN |
Ama15053 | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT |
Ama15054 | PROTEIN SIDEKICK |
Ama15055 | TROPONIN C-AKIN-1 PROTEIN |
Ama15056 | - |
Ama15057 | CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3 |
Ama15058 | |
Ama15059 | |
Ama15061 | |
Ama15062 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama15063 | PROTEIN CDV3 HOMOLOG |
Ama15064 | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER |
Ama15065 | |
Ama15066 | |
Ama15067 | CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN |
Ama15070 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama15071 | |
Ama15072 | |
Ama15075 | THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1 |
Ama15076 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Ama15077 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Ama15078 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Ama15079 | |
Ama15081 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
Ama15083 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
Ama15084 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama15086 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
Ama15087 | |
Ama15088 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
Ama15089 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
Ama15090 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama15091 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama15092 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
Ama15093 | |
Ama15094 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
Ama15095 | INHIBITOR OF APOPTOSIS |
Ama15096 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama15097 | |
Ama15098 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
Ama15099 | RIBULOSE-5-PHOSPHATE-3-EPIMERASE |