The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama14966 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Ama14967 | ETS |
Ama14968 | CYTOCHROME P450 508A4-RELATED |
Ama14969 | |
Ama14970 | |
Ama14971 | CHARGED MULTIVESICULAR BODY PROTEIN |
Ama14972 | SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASE |
Ama14975 | MICROTUBULE-ASSOCIATED PROTEIN |
Ama14978 | MICROTUBULE-ASSOCIATED PROTEIN |
Ama14981 | KUNITZ-TYPE PROTEASE INHIBITOR-RELATED |
Ama14983 | OS-9-RELATED |
Ama14984 | BTB AND MATH DOMAIN-CONTAINING PROTEIN 36-RELATED |
Ama14985 | |
Ama14986 | |
Ama14987 | DYNEIN INTERMEDIATE CHAIN |
Ama14988 | |
Ama14989 | CONTACTIN 5 |
Ama14990 | BTB/POZ DOMAIN-CONTAINING |
Ama14991 | BTB/POZ DOMAIN-CONTAINING |
Ama14992 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama14993 | BTB/POZ DOMAIN-CONTAINING |
Ama14994 | BTB/POZ DOMAIN-CONTAINING |
Ama14995 | BTB/POZ DOMAIN-CONTAINING |
Ama14997 | TESTIS EXPRESSED GENE 14 |
Ama14998 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama14999 | BTB/POZ DOMAIN-CONTAINING |
Ama14_5db7b01a | TRANSMEMBRANE PROTEIN 14, 15 |
Ama15000 | TESTIS EXPRESSED GENE 14 |
Ama15001 | SCLEROSTIN-RELATED |
Ama15003 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama15004 | NEPHRIN |
Ama15005 | |
Ama15006 | BTB/POZ DOMAIN-CONTAINING |
Ama15007 | BTB/POZ DOMAIN-CONTAINING |
Ama15008 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15009 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama15010 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama15011 | |
Ama15012 | |
Ama15013 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama15014 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama15015 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama15016 | |
Ama15017 | |
Ama15018 | |
Ama15020 | |
Ama15021 | |
Ama15025 | SWI/SNF-RELATED |
Ama15037 | ETS |
Ama15038 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |