The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama14901 | |
Ama14902 | THAP DOMAIN PROTEIN |
Ama14903 | THAP DOMAIN PROTEIN |
Ama14904 | FTP DOMAIN-CONTAINING PROTEIN |
Ama14905 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama14907 | THAP DOMAIN PROTEIN |
Ama14908 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama14909 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama14910 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama14912 | PLACENTAL PROTEIN 6 |
Ama14913 | INTIMAL THICKNESS RECEPTOR-RELATED |
Ama14914 | |
Ama14915 | |
Ama14918 | PEPTIDASE |
Ama14920 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Ama14921 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama14922 | |
Ama14923 | TRANSPOSON |
Ama14924 | PUTATIVE-RELATED |
Ama14925 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama14926 | THAP DOMAIN PROTEIN |
Ama14927 | ATP-DEPENDENT DNA HELICASE |
Ama14928 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama14929 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama14930 | YEATS DOMAIN |
Ama14931 | |
Ama14932 | |
Ama14934 | PERIAXIN-LIKE |
Ama14935 | ZINC FINGER PROTEIN 142 |
Ama14936 | UNCHARACTERIZED |
Ama14938 | |
Ama14939 | TETRATRICOPEPTIDE REPEAT PROTEIN 12 |
Ama14940 | IFT57/HIPPI |
Ama14942 | MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBER |
Ama14943 | NASOPHARYNGEAL EPITHELIUM SPECIFIC PROTEIN 1 |
Ama14944 | V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A |
Ama14945 | IODOTHYRONINE DEIODINASE |
Ama14946 | BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH |
Ama14947 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama14948 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama14949 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama14950 | THAP DOMAIN PROTEIN |
Ama14951 | |
Ama14952 | UNCHARACTERIZED |
Ama14954 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Ama14957 | |
Ama14958 | |
Ama14959 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Ama14964 | MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED |
Ama14965 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |